ENSDARG00000044415


Danio rerio

Features
Gene ID: ENSDARG00000044415
  
Biological name :tlr5a
  
Synonyms : tlr5a / toll-like receptor 5a
  
Possible biological names infered from orthology : O60602 / TLR5 / toll like receptor 5
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 51478939
Gene end: 51482591
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124209
Ensembl peptide - ENSDARP00000127318
NCBI entrez gene - 403138     See in Manteia.
swissprot - F8W4F1
swissprot - U3JAP9
ZFIN ID - ZDB-GENE-040219-14
Ensembl - ENSDARG00000044415
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TLR5ENSGALG00000009392Gallus gallus
 TLR5ENSG00000187554Homo sapiens
 Tlr5ENSMUSG00000079164Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tlr5b / toll-like receptor 5b / TLR5* / O60602* / toll like receptor 5*ENSDARG0000005232273
tlr7 / toll-like receptor 7 / Q9NYK1*ENSDARG0000006881222
TLR8 / toll like receptor 8 / Q9NR97*ENSDARG0000010483222
tlr9 / toll-like receptor 9 / Q9NR96* / AC097637.1*ENSDARG0000004449021
tlr22 / toll-like receptor 22ENSDARG0000010404521
tlr21 / toll-like receptor 21ENSDARG0000005804521
tlr3 / toll-like receptor 3 / O15455* / Q99MB1* / Mus musculus toll-like receptor 3 (Tlr3), transcript variant 3, mRNA.*ENSDARG0000001606520
tlr4al / toll-like receptor 4a, like / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000007567118
tlr1 / toll-like receptor 1 / TLR6* / TLR10* / Q15399* / Q9BXR5* / Q9EPQ1* / Q9Y2C9* / toll like receptor 6* / toll like receptor 10*ENSDARG0000010064918
tlr4ba / toll-like receptor 4b, duplicate a / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000001974218
tlr4bb / toll-like receptor 4b, duplicate b / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000002204817
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000007039217
tlr2 / toll-like receptor 2 / O60603*ENSDARG0000003775817
tlr18 / toll-like receptor 18ENSDARG0000004024917
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000002666316
tlr8b / toll-like receptor 8b / TLR8* / Q9NR97* / P58682* / toll like receptor 8*ENSDARG0000007367516
tlr20.2 / tlr20.4 / toll-like receptor 20, tandem duplicate 2 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000008870116
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000011513613
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000010952213
cd180 / CD180 molecule / Q62192* / Q99467* / CD180 antigen *ENSDARG0000009375012


Protein motifs (from Interpro)
Interpro ID Name
 IPR000157  Toll/interleukin-1 receptor homology (TIR) domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR026906  Leucine rich repeat 5
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002253 activation of immune response IMP
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0045087 innate immune response IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism increased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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