ENSDARG00000096620


Danio rerio

Features
Gene ID: ENSDARG00000096620
  
Biological name :tube1
  
Synonyms : tube1 / tubulin, epsilon 1
  
Possible biological names infered from orthology : epsilon-tubulin 1 / Q9D6T1 / Q9UJT0
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 263056
Gene end: 277689
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000064564
Ensembl peptide - ENSDARP00000114685
NCBI entrez gene - 393960     See in Manteia.
RefSeq - NM_200985
RefSeq Peptide - NP_957279
swissprot - F1QSQ1
swissprot - Q5SNS3
ZFIN ID - ZDB-GENE-040426-1174
Ensembl - ENSDARG00000096620
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000015017Gallus gallus
 TUBE1ENSG00000074935Homo sapiens
 Tube1ENSMUSG00000019845Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tube1 / tubulin, epsilon 1 / Q9D6T1* / Q9UJT0* / epsilon-tubulin 1*ENSDARG00000043982100
tubb4b / tubulin, beta 4B class IVbENSDARG0000000234432
zgc:153426ENSDARG0000010443632
zgc:65894ENSDARG0000001630132
tubb1 / tubulin, beta 1 class VI / A2AQ07* / Q9H4B7*ENSDARG0000005306632
tubb2b / tubulin, beta 2b / Q9D6F9* / P04350* / TUBB4A* / tubulin beta 4A class IVa*ENSDARG0000009859132
zgc:55461 / P04350* / Q9D6F9* / TUBB4A* / tubulin beta 4A class IVa*ENSDARG0000004172332
tubb2 / tubulin, beta 2A class IIa / Q9BVA1* / Q9CWF2* / Q13885* / TUBB2A* / TUBB2B* / Q7TMM9* / tubulin beta 2B class IIb*ENSDARG0000003952231
tubb5 / tubulin, beta 5 / TUBB* / P99024* / P07437* / tubulin beta class I* / tubulin, beta 5 class I*ENSDARG0000003799731
tubb6 / tubulin, beta 6 class V / Q922F4* / Q9BUF5*ENSDARG0000010480130
tubd1 / tubulin, delta 1 / Q9R1K7* / Q9UJT1*ENSDARG0000005821923


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR004057  Epsilon tubulin
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR017975  Tubulin, conserved site
 IPR018316  Tubulin/FtsZ, 2-layer sandwich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007017 microtubule-based process IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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