ENSMUSG00000019845


Mus musculus

Features
Gene ID: ENSMUSG00000019845
  
Biological name :Tube1
  
Synonyms : epsilon-tubulin 1 / Q9D6T1 / Tube1
  
Possible biological names infered from orthology : Q9UJT0 / tubulin epsilon 1
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: B1
Gene start: 39133976
Gene end: 39152542
  
Corresponding Affymetrix probe sets: 10362581 (MoGene1.0st)   1431873_a_at (Mouse Genome 430 2.0 Array)   1437942_x_at (Mouse Genome 430 2.0 Array)   1443481_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000150602
Ensembl peptide - ENSMUSP00000019991
NCBI entrez gene - 71924     See in Manteia.
MGI - MGI:1919174
RefSeq - NM_028006
RefSeq - XM_006512861
RefSeq Peptide - NP_082282
swissprot - A0A1L1SU34
swissprot - Q9D6T1
Ensembl - ENSMUSG00000019845
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tube1ENSDARG00000096620Danio rerio
 tube1ENSDARG00000043982Danio rerio
 ENSGALG00000015017Gallus gallus
 TUBE1ENSG00000074935Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9D6F9 / Tubb4a / tubulin, beta 4A class IVA / P04350*ENSMUSG0000006259131
Q9CWF2 / Tubb2b / tubulin, beta 2B class IIB / Q9BVA1*ENSMUSG0000004513631
Q7TMM9 / Tubb2a / tubulin, beta 2A class IIA / Q13885*ENSMUSG0000005867231
P68372 / Tubb4b / tubulin, beta 4B class IVB / P68371*ENSMUSG0000003675231
Tubb5 / P99024 / tubulin, beta 5 class I / TUBB* / P07437* / tubulin beta class I*ENSMUSG0000000152531
Tubb6 / Q922F4 / tubulin, beta 6 class V / Q9BUF5*ENSMUSG0000000147330
Tubb3 / Q9ERD7 / tubulin, beta 3 class III / Q13509*ENSMUSG0000006238030
Tubb1 / A2AQ07 / tubulin, beta 1 class VI / Q9H4B7*ENSMUSG0000001625530
Tubd1 / Q9R1K7 / tubulin, delta 1 / Q9UJT1*ENSMUSG0000002051325


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR004057  Epsilon tubulin
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR017975  Tubulin, conserved site
 IPR018316  Tubulin/FtsZ, 2-layer sandwich domain
 IPR036525  Tubulin/FtsZ, GTPase domain superfamily
 IPR037103  Tubulin/FtsZ, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007017 microtubule-based process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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