ENSDARG00000098730


Danio rerio

Features
Gene ID: ENSDARG00000098730
  
Biological name :en1b
  
Synonyms : en1b / engrailed homeobox 1b
  
Possible biological names infered from orthology : EN1 / engrailed homeobox 1 / Homeobox protein engrailed-1 / P09065 / Q05925
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 7679328
Gene end: 7683372
  
Corresponding Affymetrix probe sets: Dr.2794.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000150261
Ensembl peptide - ENSDARP00000136362
NCBI entrez gene - 541371     See in Manteia.
RefSeq - NM_001013498
RefSeq - XM_009305884
RefSeq Peptide - NP_001013516
swissprot - Q5BJ08
swissprot - A0A0R4IKF8
ZFIN ID - ZDB-GENE-980526-6
Ensembl - ENSDARG00000098730
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EN1ENSGALG00000042389Gallus gallus
 EN1ENSG00000163064Homo sapiens
 En1ENSMUSG00000058665Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
en1a / engrailed homeobox 1a / EN1* / Q05925* / engrailed homeobox 1*ENSDARG0000001432151
en2a / P09015 / engrailed homeobox 2a / EN2* / P09066* / P19622* / engrailed homeobox 2* / Homeobox protein engrailed-2 *ENSDARG0000002659950
en2b / engrailed homeobox 2b / EN2* / P09066* / P19622* / engrailed homeobox 2* / Homeobox protein engrailed-2 *ENSDARG0000003886846
vax2 / Q801E1 / ventral anterior homeobox 2 / Q9UIW0* / Q9WTP9*ENSDARG0000005870219
vax1 / ventral anterior homeobox 1 / Q2NKI2* / Q5SQQ9*ENSDARG0000002191618
emx2 / empty spiracles homeobox 2 / Q04743* / Q04744* / Homeobox protein EMX2 *ENSDARG0000003970116
noto / notochord homeobox / A8MTQ0* / Q5TIS6* / Homeobox protein notochord *ENSDARG0000002120116
emx1 / Q804S6 / empty spiracles homeobox 1ENSDARG0000003956916
emx3 / empty spiracles homeobox 3ENSDARG0000002041716


Protein motifs (from Interpro)
Interpro ID Name
 IPR000747  Homeobox domain engrailed
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR019549  Homeobox engrailed, C-terminal
 IPR019737  Homeobox engrailed-type, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0048663 neuron fate commitment IEP
 biological_processGO:0060385 axonogenesis involved in innervation IGI
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009244 primary motor neuron primary motor neuron axon truncated , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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