ENSG00000070915


Homo sapiens

Features
Gene ID: ENSG00000070915
  
Biological name :SLC12A3
  
Synonyms : P55017 / SLC12A3 / solute carrier family 12 member 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q13
Gene start: 56865207
Gene end: 56915850
  
Corresponding Affymetrix probe sets: 208354_s_at (Human Genome U133 Plus 2.0 Array)   215274_at (Human Genome U133 Plus 2.0 Array)   231634_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000262502
Ensembl peptide - ENSP00000402152
Ensembl peptide - ENSP00000456149
Ensembl peptide - ENSP00000457552
NCBI entrez gene - 6559     See in Manteia.
OMIM - 600968
RefSeq - XM_005256119
RefSeq - NM_000339
RefSeq - NM_001126107
RefSeq - NM_001126108
RefSeq Peptide - NP_000330
RefSeq Peptide - NP_001119579
RefSeq Peptide - NP_001119580
swissprot - P55017
swissprot - J3QSS1
Ensembl - ENSG00000070915
  
Related genetic diseases (OMIM): 263800 - Gitelman syndrome, 263800
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc12a3ENSDARG00000013855Danio rerio
 SLC12A3ENSGALG00000002957Gallus gallus
 P59158ENSMUSG00000031766Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q13621 / SLC12A1 / solute carrier family 12 member 1ENSG0000007480352
P55011 / SLC12A2 / solute carrier family 12 member 2ENSG0000006465152
Q9UHW9 / SLC12A6 / solute carrier family 12 member 6ENSG0000014019926
Q9Y666 / SLC12A7 / solute carrier family 12 member 7ENSG0000011350425
Q9UP95 / SLC12A4 / solute carrier family 12 member 4ENSG0000012406725
Q9H2X9 / SLC12A5 / solute carrier family 12 member 5ENSG0000012414025
Q9BXP2 / SLC12A9 / solute carrier family 12 member 9ENSG0000014682821
A0AV02 / SLC12A8 / solute carrier family 12 member 8ENSG0000022195517


Protein motifs (from Interpro)
Interpro ID Name
 IPR002948  Thiazide-sensitive Na-K-Cl co-transporter
 IPR004841  Amino acid permease/ SLC12A domain
 IPR004842  SLC12A transporter family
 IPR013612  Amino acid permease, N-terminal
 IPR018491  SLC12A transporter, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport ISS
 biological_processGO:0035725 sodium ion transmembrane transport ISS
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IDA
 cellular_componentGO:0070062 extracellular exosome IDA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015293 symporter activity IEA
 molecular_functionGO:0015377 cation:chloride symporter activity IEA
 molecular_functionGO:0015378 sodium:chloride symporter activity TAS


Pathways (from Reactome)
Pathway description
Cation-coupled Chloride cotransporters
Defective SLC12A3 causes Gitelman syndrome (GS)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000017 Nocturia "Abnormaly increased production of urine during the night leading to an unusually frequent need to urinate." [HPO:sdoelken]
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 HP:0000103 Polyuria 
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 HP:0000128 Renal potassium wasting 
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 HP:0000622 Blurred vision 
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 HP:0000805 Enuresis "Lack of the ability to control the urinary bladder leading to involuntary urination at an age where control of the bladder should already be possible." [HPO:sdoelken]
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 HP:0000823 Delayed puberty 
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 HP:0000848 Increased plasma renin 
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 HP:0000934 Chondrocalcinosis 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001281 Tetany 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001657 Prolonged QT interval on EKG 
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 HP:0001949 Hypokalemic alkalosis 
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 HP:0001954 Fever, episodic "Periodic (episodic or recurrent) bouts of fever that do not have an infectious cause." [HPO:curators]
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 HP:0001959 Polydipsia 
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 HP:0001962 Palpitations 
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 HP:0002013 Vomiting 
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 HP:0002019 Constipation 
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 HP:0002027 Abdominal pain 
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 HP:0002321 Vertigo "An abnormal sensation of spinning while the body is actually stationary." [HPO:curators]
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 HP:0002615 Hypotension 
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 HP:0002829 Arthralgia 
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 HP:0002900 Hypokalemia 
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 HP:0002917 Hypomagnesemia 
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 HP:0003127 Hypocalciuria 
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 HP:0003201 Rhabdomyolysis 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003394 Muscle cramps 
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 HP:0003401 Paresthesia "Abnormal sensations such as tingling, pricking, or numbness of the skin with no apparent physical cause." [HPO:curators]
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 HP:0003470 Paralysis "Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement." [HPO:curators]
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 HP:0003621 Juvenile onset 
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 HP:0004756 Ventricular tachycardia 
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 HP:0005567 Renal magnesium wasting 
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0030083 Salt craving "An excessive desire to eat salt (sodium chloride) or salty foods." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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