ENSG00000099365


Homo sapiens

Features
Gene ID: ENSG00000099365
  
Biological name :STX1B
  
Synonyms : P61266 / STX1B / syntaxin 1B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p11.2
Gene start: 30989256
Gene end: 31010661
  
Corresponding Affymetrix probe sets: 230691_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000215095
Ensembl peptide - ENSP00000455899
NCBI entrez gene - 112755     See in Manteia.
OMIM - 601485
RefSeq - XM_017022893
RefSeq - NM_052874
RefSeq Peptide - NP_443106
swissprot - P61266
Ensembl - ENSG00000099365
  
Related genetic diseases (OMIM): 616172 - Generalized epilepsy with febrile seizures plus, type 9, 616172
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stx1bENSDARG00000000503Danio rerio
 Stx1bENSMUSG00000030806Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STX1A / Q16623 / syntaxin 1AENSG0000010608983
STX2 / P32856 / syntaxin 2ENSG0000011145064
STX3 / Q13277 / syntaxin 3ENSG0000016690061
STX4 / Q12846 / syntaxin 4ENSG0000010349647
STX11 / O75558 / syntaxin 11ENSG0000013560432
STX19 / Q8N4C7 / syntaxin 19ENSG0000017875029


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE
 IPR037016  Syntaxin-1B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001956 positive regulation of neurotransmitter secretion ISS
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006904 vesicle docking involved in exocytosis ISS
 biological_processGO:0010468 regulation of gene expression ISS
 biological_processGO:0010807 regulation of synaptic vesicle priming ISS
 biological_processGO:0010977 negative regulation of neuron projection development ISS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016081 synaptic vesicle docking ISS
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0017157 regulation of exocytosis IEA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IEA
 biological_processGO:0060025 regulation of synaptic activity ISS
 biological_processGO:0061669 spontaneous neurotransmitter secretion IEA
 biological_processGO:0072657 protein localization to membrane IEA
 biological_processGO:0098967 exocytic insertion of neurotransmitter receptor to postsynaptic membrane IEA
 biological_processGO:1903422 negative regulation of synaptic vesicle recycling IEA
 biological_processGO:1904050 positive regulation of spontaneous neurotransmitter secretion IEA
 biological_processGO:1905302 negative regulation of macropinocytosis ISS
 biological_processGO:2000463 positive regulation of excitatory postsynaptic potential ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0008021 synaptic vesicle IBA
 cellular_componentGO:0016020 membrane ISS
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0042734 presynaptic membrane IEA
 cellular_componentGO:0048787 presynaptic active zone membrane IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0019901 protein kinase binding ISS
 molecular_functionGO:0019904 protein domain specific binding IEA


Pathways (from Reactome)
Pathway description
Toxicity of botulinum toxin type C (BoNT/C)
LGI-ADAM interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
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 HP:0002121 Absence seizures "Recurrent absence seizures are `generalized seizures` (HP:0002197) that are characterized by a sudden cessation of motor activity and by a blank facial expression with flickering of the eyelids. There is no convulsive muscular activity or loss of postural control." [HPO:probinson]
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 HP:0002373 Febrile seizures "Febrile seizures are convulsions induced by a fever in infants or small children and are generally characterized by loss of consciousness and tonic-clonic movements. Most febrile seizures last a minute or two." [HPO:curators]
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 HP:0002384 Complex partial seizures "A `partial seizure` (HP:0007359) characterized by impairment or loss of consciousness." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0010819 Atonic seizures "A type of `seizure` (HP:0001250) characterized by a suddenloss of musle tone. Usually, consciousness is retained. In an atonic seizure, the eyelids may droop, the head may nod, and the person may drop things and fall to the ground." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000168481 LGI3 / Q8N145 / leucine rich repeat LGI family member 3  / reaction / complex






 

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