ENSG00000100697


Homo sapiens

Features
Gene ID: ENSG00000100697
  
Biological name :DICER1
  
Synonyms : DICER1 / dicer 1, ribonuclease III / Q9UPY3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q32.13
Gene start: 95086228
Gene end: 95158010
  
Corresponding Affymetrix probe sets: 206061_s_at (Human Genome U133 Plus 2.0 Array)   212888_at (Human Genome U133 Plus 2.0 Array)   213229_at (Human Genome U133 Plus 2.0 Array)   216260_at (Human Genome U133 Plus 2.0 Array)   216280_s_at (Human Genome U133 Plus 2.0 Array)   216281_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000451041
Ensembl peptide - ENSP00000444719
Ensembl peptide - ENSP00000452556
Ensembl peptide - ENSP00000343745
Ensembl peptide - ENSP00000376783
Ensembl peptide - ENSP00000433060
Ensembl peptide - ENSP00000433926
Ensembl peptide - ENSP00000435681
Ensembl peptide - ENSP00000437256
NCBI entrez gene - 23405     See in Manteia.
OMIM - 606241
RefSeq - XM_017021123
RefSeq - XM_011536599
RefSeq - XM_011536600
RefSeq - XM_011536601
RefSeq - XM_011536602
RefSeq - XM_011536604
RefSeq - XM_011536605
RefSeq - XM_017021120
RefSeq - XM_017021121
RefSeq - XM_017021122
RefSeq - NM_001195573
RefSeq - NM_001271282
RefSeq - NM_001291628
RefSeq - NM_030621
RefSeq - NM_177438
RefSeq Peptide - NP_085124
RefSeq Peptide - NP_001182502
RefSeq Peptide - NP_001258211
RefSeq Peptide - NP_001278557
RefSeq Peptide - NP_803187
swissprot - Q9UPY3
swissprot - Q5D0K5
swissprot - H0YJZ6
swissprot - A0A076VAC5
Ensembl - ENSG00000100697
  
Related genetic diseases (OMIM): 138800 - Goiter, multinodular 1, with or without Sertoli-Leydig cell tumors, 138800
  180295 - Rhabdomyosarcoma, embryonal, 2, 180295
  601200 - Pleuropulmonary blastoma, 601200
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dicer1ENSDARG00000001129Danio rerio
 DICER1ENSGALG00000010999Gallus gallus
 Dicer1ENSMUSG00000041415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FANCM / Q8IYD8 / Fanconi anemia complementation group MENSG0000018779014
IFIH1 / Q9BYX4 / interferon induced with helicase C domain 1ENSG000001152679
DDX58 / O95786 / DExD/H-box helicase 58ENSG000001072018
DHX58 / Q96C10 / DExH-box helicase 58ENSG000001087718


Protein motifs (from Interpro)
Interpro ID Name
 IPR000999  Ribonuclease III domain
 IPR001650  Helicase, C-terminal
 IPR003100  PAZ domain
 IPR005034  Dicer dimerisation domain
 IPR006935  Helicase/UvrB, N-terminal
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014720  Double-stranded RNA-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036085  PAZ domain superfamily
 IPR036389  Ribonuclease III, endonuclease domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISS
 biological_processGO:0006309 apoptotic DNA fragmentation IBA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0010586 miRNA metabolic process TAS
 biological_processGO:0010626 negative regulation of Schwann cell proliferation ISS
 biological_processGO:0014040 positive regulation of Schwann cell differentiation ISS
 biological_processGO:0021675 nerve development ISS
 biological_processGO:0030422 production of siRNA involved in RNA interference TAS
 biological_processGO:0030423 targeting of mRNA for destruction involved in RNA interference IMP
 biological_processGO:0031047 gene silencing by RNA IEA
 biological_processGO:0031054 pre-miRNA processing IDA
 biological_processGO:0031643 positive regulation of myelination ISS
 biological_processGO:0032290 peripheral nervous system myelin formation ISS
 biological_processGO:0033168 conversion of ds siRNA to ss siRNA involved in RNA interference IMP
 biological_processGO:0035087 siRNA loading onto RISC involved in RNA interference IDA
 biological_processGO:0035196 production of miRNAs involved in gene silencing by miRNA ISS
 biological_processGO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA IDA
 biological_processGO:0036404 conversion of ds siRNA to ss siRNA IMP
 biological_processGO:0048812 neuron projection morphogenesis ISS
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IDA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0030426 growth cone IEA
 cellular_componentGO:0033167 ARC complex IC
 cellular_componentGO:0035068 micro-ribonucleoprotein complex IDA
 cellular_componentGO:0070062 extracellular exosome IDA
 cellular_componentGO:0070578 RISC-loading complex IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003725 double-stranded RNA binding IMP
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004521 endoribonuclease activity TAS
 molecular_functionGO:0004525 ribonuclease III activity EXP
 molecular_functionGO:0004530 deoxyribonuclease I activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016891 endoribonuclease activity, producing 5"-phosphomonoesters IEA
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0035197 siRNA binding IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070883 pre-miRNA binding IDA


Pathways (from Reactome)
Pathway description
MicroRNA (miRNA) biogenesis
Small interfering RNA (siRNA) biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000866 Euthyroid multinodular goiter 
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 HP:0001472 Familial predisposition 
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 HP:0001939 Metabolism abnormality 
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 HP:0002664 Neoplasia "An organ or organ-system abnormality that consists of uncontrolled autonomous cell-proliferation which can occur in any part of the body as a benign or malignant tumour or neoplasm." [HPO:curators]
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 HP:0002667 Nephroblastoma (Wilms tumor) "A kind of renal tumor primarily affecting children. It is characterized by an abnormal proliferation of the metanephric blastema cells, which are believed to be primitive embryologic cells of the kidney. Clinically, nephroblatoma usually presents as an abdominal mass, and in some cases with abdominal pain, hypertension, hematuria, and fever." [HPO:curators]
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 HP:0002671 Basal cell carcinoma 
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 HP:0002859 Rhabdomyosarcoma 
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 HP:0002885 Medulloblastoma 
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 HP:0002890 Thyroid carcinoma 
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 HP:0002895 Papillary thyroid carcinoma 
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 HP:0005584 Renal cell carcinoma "Renal cell carcinoma (also known as hypernephroma) is the most common form of kidney cancer arising from the proximal renal tubule. The tissue of origin for renal cell carcinoma is the proximal renal tubular epithelium. Renal cell carcinoma can be classified as 1) clear cell carcinoma, 2) papillary carcinoma, 3) chromophobe renal carcinoma, and 4) collecting duct carcinoma." [HPO:curators]
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 HP:0005987 Multinodular goiter 
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 HP:0006743 Embryonal rhabdomyosarcoma 
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 HP:0006779 Alveolar rhabdomyosarcoma 
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 HP:0007129 Cerebellar medulloblastoma 
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 HP:0025388 Thyroid nodule "A nodular lesion that develops in the thyroid gland. The term "thyroid nodule" refers to any abnormal growth that forms a lump in the thyroid gland." []
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 HP:0030071 Medulloepithelioma "A primitive neuroectodermal tumor that originates from the cells of the embryonic medullary canal." [pmid:17566306]
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 HP:0030434 Pilomatrixoma "Pilomatricoma is an asymptomatic slowly growing benign cutaneous tumor, differentiating towards the hair matrix of the hair follicle. It is covered by normal or hyperemic skin, and usually varies in size from 0.5 to 3 cm." [HPO:probinson, pmid:21430899]
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 HP:0030983 Ovarian thecoma "A sex cord-stromal tumor of the ovary. Thecomas range from small tumors to large solid or solid-cystic masses of up to 15 cm. They are unilateral in over 90 percent of cases and are rarely malignant. Thecomas are stromal tumors made up of cells that resemble theca cells, lutein cells and fibroblasts. They are traditionally classified within the sex cord-stromal tumor category of ovarian tumor types." [NCIT:C1882229, PMID:27284435]
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 HP:0100528 Pleuropulmonary blastoma "A rare cancer originating in the lung or pleural cavity that occurs most often in infants and young children but also has been reported in adults. Pleuropulmonary blastoma is regarded as malignant." [HPO:sdoelken]
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 HP:0100615 Ovarian neoplasm "The presence of a `neoplasm` (MPATH:218) the `ovary` (FMA:7209)." [HPO:probinson]
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 HP:0100617 Testicular seminoma "The presence of a `seminoma` (MPATH:317), an undifferentiated germ cell tumor of the `testis` (FMA:7210)." [HPO:sdoelken]
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 HP:0100619 Sertoli cell neoplasm "The presence of a `neoplasm` (MPATH:218) of the `testis` (FMA:7210) with origin in a ` Sertoli cell` (CL:0000216)." [HPO:probinson]
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 HP:0200063 Colorectal polyps 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000123908 AGO2 / Q9UKV8 / argonaute 2, RISC catalytic component  / complex
 ENSG00000139546 Q15633 / TARBP2 / TARBP2, RISC loading complex RNA binding subunit  / complex
 ENSG00000180228 PRKRA / O75569 / protein activator of interferon induced protein kinase EIF2AK2  / complex






 

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