ENSG00000130595


Homo sapiens

Features
Gene ID: ENSG00000130595
  
Biological name :TNNT3
  
Synonyms : P45378 / TNNT3 / troponin T3, fast skeletal type
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p15.5
Gene start: 1919562
Gene end: 1938706
  
Corresponding Affymetrix probe sets: 1569986_x_at (Human Genome U133 Plus 2.0 Array)   205693_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000415614
Ensembl peptide - ENSP00000413203
Ensembl peptide - ENSP00000492914
Ensembl peptide - ENSP00000493372
Ensembl peptide - ENSP00000493331
Ensembl peptide - ENSP00000278317
Ensembl peptide - ENSP00000344870
Ensembl peptide - ENSP00000370969
Ensembl peptide - ENSP00000370970
Ensembl peptide - ENSP00000370975
Ensembl peptide - ENSP00000370991
Ensembl peptide - ENSP00000371001
Ensembl peptide - ENSP00000380468
Ensembl peptide - ENSP00000380471
NCBI entrez gene - 7140     See in Manteia.
OMIM - 600692
RefSeq - XM_017018219
RefSeq - XM_017018208
RefSeq - XM_017018209
RefSeq - XM_017018210
RefSeq - XM_017018211
RefSeq - XM_017018212
RefSeq - XM_017018213
RefSeq - XM_017018214
RefSeq - XM_017018215
RefSeq - XM_017018216
RefSeq - XM_017018217
RefSeq - XM_017018218
RefSeq - NM_001042780
RefSeq - NM_001042781
RefSeq - NM_001042782
RefSeq - NM_001297646
RefSeq - NM_006757
RefSeq - XM_006718288
RefSeq - XM_006718290
RefSeq - XM_006718293
RefSeq - XM_006718294
RefSeq - XM_006718296
RefSeq - XM_006718299
RefSeq - XM_006718300
RefSeq - XM_006718302
RefSeq - XM_011520343
RefSeq - XM_017018205
RefSeq - XM_017018206
RefSeq - XM_017018207
RefSeq Peptide - NP_001036246
RefSeq Peptide - NP_001036247
RefSeq Peptide - NP_001284575
RefSeq Peptide - NP_006748
RefSeq Peptide - NP_001036245
swissprot - A0A286YFB1
swissprot - C9JZN9
swissprot - C9JCA5
swissprot - F8WA37
swissprot - H9KVA2
swissprot - P45378
Ensembl - ENSG00000130595
  
Related genetic diseases (OMIM): 601680 - Arthrogryposis, distal, type 2B, 601680
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnnt3aENSDARG00000030270Danio rerio
 tnnt3bENSDARG00000068457Danio rerio
 TNNT3ENSGALG00000006572Gallus gallus
 Tnnt3ENSMUSG00000061723Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TNNT1 / P13805 / troponin T1, slow skeletal typeENSG0000010504860
TNNT2 / P45379 / troponin T2, cardiac typeENSG0000011819458


Protein motifs (from Interpro)
Interpro ID Name
 IPR001978  Troponin
 IPR027707  Troponin T
 IPR027708  Troponin T, fast skeletal muscle


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003009 skeletal muscle contraction IDA
 biological_processGO:0006937 regulation of muscle contraction IEA
 biological_processGO:0006942 regulation of striated muscle contraction IEA
 biological_processGO:0030049 muscle filament sliding TAS
 biological_processGO:0043462 regulation of ATPase activity IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005861 troponin complex IEA
 molecular_functionGO:0003779 actin binding IDA
 molecular_functionGO:0005523 tropomyosin binding IMP
 molecular_functionGO:0030172 troponin C binding IPI
 molecular_functionGO:0030899 calcium-dependent ATPase activity IDA
 molecular_functionGO:0031013 troponin I binding IPI
 molecular_functionGO:0048306 calcium-dependent protein binding IDA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000275 Narrow face 
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000325 Triangular facies 
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000411 Protruding ears 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000465 Webbed neck 
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 HP:0000470 Short neck 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000598 Abnormality of the ears 
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 HP:0001181 Adducted thumbs 
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 HP:0001193 Ulnar deviation of the hand or of fingers of the hand 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001838 Vertical talus 
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 HP:0001840 Metatarsus varus "Metatarsus varus (adductus) is one of the most common foot deformities, that is defined as a transverse plane deformity in Lisfranc s (tarsometatarsal) joints in which the metatarsals are deviated medially. The relationship between talus and calcaneus is normal. On inspection the toes angle abruptly towards the midline, creating a C-shaped lateral foot border with a prominent styloid process of the 5th metatarsal. The result is that the forefoot is twisted inwards relative to the heel, so that the sole faces the midline." [HPO:curators]
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 HP:0001848 Calcaneovalgus deformities 
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 HP:0001883 Talipes 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0003049 Ulnar deviation of the wrist 
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 HP:0003272 Abnormality of the hip "An abnormality of the hip joint or the surrounding anatomic region." [HPO:curators]
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 HP:0003422 Vertebral segmentation defects 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005272 Prominent nasolabial folds 
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 HP:0005684 Distal arthrogryposis 
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 HP:0006109 Aplasia of the interphalangeal creases "Absence of the interphalangeal creases of the fingers." [HPO:curators]
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 HP:0006501 Aplasia/Hypoplasia of the radius "A small/hypoplastic or absent/aplastic radius." [HPO:curators]
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 HP:0007598 Bilateral single palmar creases 
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 HP:0008368 Synostosis involving tarsal bones 
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 HP:0009465 Ulnar deviation of fingers 
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 HP:0010557 Overlapping fingers "Overlapping of the fingers occuring as the result of a deviation of the fingers from their normal position." [HPO:curators]
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 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
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 HP:0100830 Round ear 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000114854 TNNC1 / P63316 / troponin C1, slow skeletal and cardiac type  / complex
 ENSG00000129991 TNNI3 / P19429 / troponin I3, cardiac type  / complex
 ENSG00000130598 TNNI2 / P48788 / troponin I2, fast skeletal type  / complex
 ENSG00000101470 TNNC2 / P02585 / troponin C2, fast skeletal type  / complex
 ENSG00000159173 TNNI1 / P19237 / troponin I1, slow skeletal type  / complex






 

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