ENSG00000134253


Homo sapiens

Features
Gene ID: ENSG00000134253
  
Biological name :TRIM45
  
Synonyms : Q9H8W5 / TRIM45 / tripartite motif containing 45
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p13.1
Gene start: 117111060
Gene end: 117122587
  
Corresponding Affymetrix probe sets: 219923_at (Human Genome U133 Plus 2.0 Array)   242056_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358473
Ensembl peptide - ENSP00000431261
Ensembl peptide - ENSP00000474935
Ensembl peptide - ENSP00000256649
Ensembl peptide - ENSP00000358476
NCBI entrez gene - 80263     See in Manteia.
OMIM - 609318
RefSeq - XM_011542199
RefSeq - NM_001145635
RefSeq - NM_025188
RefSeq Peptide - NP_001139107
RefSeq Peptide - NP_079464
swissprot - Q5T2K3
swissprot - Q9H8W5
swissprot - S4R407
swissprot - H0YCA7
Ensembl - ENSG00000134253
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim45ENSDARG00000076781Danio rerio
 TRIM45ENSGALG00000014818Gallus gallus
 Q6PFY8ENSMUSG00000033233Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM3 / O75382 / tripartite motif containing 3ENSG0000011017125
TRIM2 / Q9C040 / tripartite motif containing 2ENSG0000010965424
Q9BRZ2 / TRIM56 / tripartite motif containing 56ENSG0000016987124
Q2Q1W2 / TRIM71 / tripartite motif containing 71ENSG0000020655723
O15164 / TRIM24 / tripartite motif containing 24ENSG0000012277920
Q9UPN9 / TRIM33 / tripartite motif containing 33ENSG0000019732320
Q13263 / TRIM28 / tripartite motif containing 28ENSG0000013072617
O15016 / TRIM66 / tripartite motif containing 66ENSG0000016643616


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001298  Filamin/ABP280 repeat
 IPR001841  Zinc finger, RING-type
 IPR003649  B-box, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR017868  Filamin/ABP280 repeat-like
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027267  AH/BAR domain superfamily
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060348 bone development IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0045171 intercellular bridge IDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Interferon gamma signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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