ENSG00000206557


Homo sapiens

Features
Gene ID: ENSG00000206557
  
Biological name :TRIM71
  
Synonyms : Q2Q1W2 / TRIM71 / tripartite motif containing 71
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p22.3
Gene start: 32818018
Gene end: 32897826
  
Corresponding Affymetrix probe sets: 231310_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000373272
NCBI entrez gene - 131405     See in Manteia.
RefSeq - NM_001039111
RefSeq Peptide - NP_001034200
swissprot - Q2Q1W2
Ensembl - ENSG00000206557
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 E7FAM5ENSDARG00000075593Danio rerio
 TRIM71ENSGALG00000019622Gallus gallus
 Q1PSW8ENSMUSG00000079259Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM3 / O75382 / tripartite motif containing 3ENSG0000011017127
TRIM2 / Q9C040 / tripartite motif containing 2ENSG0000010965426
Q9H8W5 / TRIM45 / tripartite motif containing 45ENSG0000013425316
O15164 / TRIM24 / tripartite motif containing 24ENSG0000012277915
Q9UPN9 / TRIM33 / tripartite motif containing 33ENSG0000019732315
Q9BRZ2 / TRIM56 / tripartite motif containing 56ENSG0000016987114
Q13263 / TRIM28 / tripartite motif containing 28ENSG0000013072614
O15016 / TRIM66 / tripartite motif containing 66ENSG0000016643613


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001258  NHL repeat
 IPR001298  Filamin/ABP280 repeat
 IPR001841  Zinc finger, RING-type
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013017  NHL repeat, subgroup
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR017868  Filamin/ABP280 repeat-like
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000082 G1/S transition of mitotic cell cycle IEA
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0008543 fibroblast growth factor receptor signaling pathway IEA
 biological_processGO:0010586 miRNA metabolic process IEA
 biological_processGO:0010608 posttranscriptional regulation of gene expression IMP
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0017148 negative regulation of translation IDA
 biological_processGO:0021915 neural tube development IEA
 biological_processGO:0031047 gene silencing by RNA IEA
 biological_processGO:0035196 production of miRNAs involved in gene silencing by miRNA IMP
 biological_processGO:0035278 miRNA mediated inhibition of translation IEA
 biological_processGO:0051246 regulation of protein metabolic process IEA
 biological_processGO:0051865 protein autoubiquitination IEA
 biological_processGO:0060964 regulation of gene silencing by miRNA IEA
 biological_processGO:0061158 3"-UTR-mediated mRNA destabilization IDA
 biological_processGO:0071310 cellular response to organic substance IEA
 biological_processGO:0072089 stem cell proliferation IEA
 biological_processGO:2000177 regulation of neural precursor cell proliferation IEA
 biological_processGO:2000637 positive regulation of gene silencing by miRNA IEA
 cellular_componentGO:0000932 P-body ISS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030371 translation repressor activity IDA
 molecular_functionGO:0035198 miRNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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