ENSG00000110171


Homo sapiens

Features
Gene ID: ENSG00000110171
  
Biological name :TRIM3
  
Synonyms : O75382 / TRIM3 / tripartite motif containing 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: p15.4
Gene start: 6448613
Gene end: 6474459
  
Corresponding Affymetrix probe sets: 204910_s_at (Human Genome U133 Plus 2.0 Array)   204911_s_at (Human Genome U133 Plus 2.0 Array)   213884_s_at (Human Genome U133 Plus 2.0 Array)   213885_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000433102
Ensembl peptide - ENSP00000433070
Ensembl peptide - ENSP00000437283
Ensembl peptide - ENSP00000491359
Ensembl peptide - ENSP00000445460
Ensembl peptide - ENSP00000340797
Ensembl peptide - ENSP00000352508
NCBI entrez gene - 10612     See in Manteia.
OMIM - 605493
RefSeq - XM_017017099
RefSeq - NM_001248006
RefSeq - NM_001248007
RefSeq - NM_006458
RefSeq - NM_033278
RefSeq - XM_011519844
RefSeq - XM_011519845
RefSeq - XM_017017098
RefSeq Peptide - NP_001234935
RefSeq Peptide - NP_006449
RefSeq Peptide - NP_150594
RefSeq Peptide - NP_001234936
swissprot - A0A1W2PPI7
swissprot - E9PMW5
swissprot - E9PMK8
swissprot - O75382
Ensembl - ENSG00000110171
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim3aENSDARG00000063711Danio rerio
 trim3bENSDARG00000005397Danio rerio
 TRIM3ENSGALG00000034004Gallus gallus
 Trim3ENSMUSG00000036989Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM2 / Q9C040 / tripartite motif containing 2ENSG0000010965467
Q2Q1W2 / TRIM71 / tripartite motif containing 71ENSG0000020655732
Q9H8W5 / TRIM45 / tripartite motif containing 45ENSG0000013425319
Q9BRZ2 / TRIM56 / tripartite motif containing 56ENSG0000016987117
Q9UPN9 / TRIM33 / tripartite motif containing 33ENSG0000019732317
O15164 / TRIM24 / tripartite motif containing 24ENSG0000012277916
O15016 / TRIM66 / tripartite motif containing 66ENSG0000016643615
Q13263 / TRIM28 / tripartite motif containing 28ENSG0000013072614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001258  NHL repeat
 IPR001298  Filamin/ABP280 repeat
 IPR001841  Zinc finger, RING-type
 IPR003649  B-box, C-terminal
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013017  NHL repeat, subgroup
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017868  Filamin/ABP280 repeat-like
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008022 protein C-terminus binding TAS
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Interferon gamma signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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