ENSG00000137601


Homo sapiens

Features
Gene ID: ENSG00000137601
  
Biological name :NEK1
  
Synonyms : NEK1 / NIMA related kinase 1 / Q96PY6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: q33
Gene start: 169392857
Gene end: 169612629
  
Corresponding Affymetrix probe sets: 1564093_at (Human Genome U133 Plus 2.0 Array)   211086_x_at (Human Genome U133 Plus 2.0 Array)   213328_at (Human Genome U133 Plus 2.0 Array)   213331_s_at (Human Genome U133 Plus 2.0 Array)   216213_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424938
Ensembl peptide - ENSP00000424757
Ensembl peptide - ENSP00000427653
Ensembl peptide - ENSP00000408020
Ensembl peptide - ENSP00000421525
Ensembl peptide - ENSP00000423332
Ensembl peptide - ENSP00000424152
NCBI entrez gene - 4750     See in Manteia.
OMIM - 604588
RefSeq - XM_017008254
RefSeq - XM_011532003
RefSeq - XM_011532004
RefSeq - XM_011532005
RefSeq - XM_017008249
RefSeq - XM_017008250
RefSeq - XM_017008251
RefSeq - XM_017008252
RefSeq - XM_017008253
RefSeq - NM_001199397
RefSeq - NM_001199398
RefSeq - NM_001199399
RefSeq - NM_001199400
RefSeq - NM_012224
RefSeq - XM_006714228
RefSeq Peptide - NP_001186329
RefSeq Peptide - NP_001186326
RefSeq Peptide - NP_001186327
RefSeq Peptide - NP_036356
RefSeq Peptide - NP_001186328
swissprot - Q96PY6
swissprot - H0Y8M6
swissprot - D6RBG5
Ensembl - ENSG00000137601
  
Related genetic diseases (OMIM): 263520 - Short-rib thoracic dysplasia 6 with or without polydactyly, 263520
  617892 - {Amyotrophic lateral sclerosis, susceptibility to, 24}, 617892
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nek1ENSDARG00000022350Danio rerio
 NEK1ENSGALG00000009683Gallus gallus
 Nek1ENSMUSG00000031644Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NEK5 / Q6P3R8 / NIMA related kinase 5ENSG0000019716821
NEK3 / P51956 / NIMA related kinase 3ENSG0000013609817
NEK4 / P51957 / NIMA related kinase 4ENSG0000011490416
NEK9 / Q8TD19 / NIMA related kinase 9ENSG0000011963815
NEK11 / Q8NG66 / NIMA related kinase 11ENSG0000011467013
NEK8 / Q86SG6 / NIMA related kinase 8ENSG0000016060213
NEK2 / P51955 / NIMA related kinase 2ENSG0000011765011
NEK6 / Q9HC98 / NIMA related kinase 6ENSG000001194088
NEK7 / Q8TDX7 / NIMA related kinase 7ENSG000001514148


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IDA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007346 regulation of mitotic cell cycle IBA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0018108 peptidyl-tyrosine phosphorylation IEA
 biological_processGO:0023014 signal transduction by protein phosphorylation IBA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0031098 stress-activated protein kinase signaling cascade IBA
 biological_processGO:0032147 activation of protein kinase activity IBA
 biological_processGO:0042769 DNA damage response, detection of DNA damage IMP
 biological_processGO:0042981 regulation of apoptotic process IBA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0000242 pericentriolar material IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IDA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IBA
 molecular_functionGO:0004713 protein tyrosine kinase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IMP
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0071889 14-3-3 protein binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000062 Ambiguous genitalia 
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 HP:0000113 Polycystic kidney 
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 HP:0000161 Median cleft lip "A type of `cleft lip` (HP:0000204) presenting as a midline (median) gap in the upper lip." [HPO:curators]
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 HP:0000171 Microglossia 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000217 Xerostomia "Dryness of the mouth due to salivary gland dysfunction." [HPO:curators]
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000712 Emotional lability 
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 HP:0000713 Agitation 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000739 Anxiety 
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 HP:0000773 Short ribs 
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 HP:0000774 Narrow chest 
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 HP:0000888 Short, horizontal ribs 
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 HP:0000895 Hooked clavicles 
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 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
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 HP:0001177 Preaxial polydactyly (hands) "Supernumerary digits located at the radial side of the hand. Polydactyly (supernumerary digits) involving the thumb occurs in many distinct forms of high variability and severity. Ranging from fleshy nubbins over varying degrees of partial duplication/splitting to completely duplicated or even triplicated thumbs or preaxial (on the radial side of the hand) supernumerary digits." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001302 Pachygyria "A congenital abnormality of the cerebral hemisphere chacterized by unusually thick gyrations (convolutions) of the cerebral cortex." [HPO:curators]
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 HP:0001320 Cerebellar vermis hypoplasia 
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 HP:0001395 Hepatic fibrosis 
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001789 Hydrops fetalis 
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 HP:0002017 Nausea and vomiting 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002094 Dyspnea 
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 HP:0002180 Neurodegeneration 
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 HP:0002566 Intestinal malrotation "An abnormality of the intestinal rotation and fixation that normally occurs during the development of the gut. This can lead to volvulus, or twisting of the intestine that causes obstruction and necrosis." [HPO:curators]
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 HP:0002878 Early respiratory failure 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003394 Muscle cramps 
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 HP:0003470 Paralysis "Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement." [HPO:curators]
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 HP:0005349 Hypoplasia of the epiglottis 
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 HP:0005766 Disproportionate shortening of the tibia 
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 HP:0005817 Hallucal and postaxial polysyndactyly of the feet 
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 HP:0005873 Polysyndactyly of great toes 
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 HP:0005945 Laryngeal obstruction 
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 HP:0006644 Thoracic dysplasia 
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 HP:0006956 Dilation of lateral ventricles 
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 HP:0007354 Amyotrophic lateral sclerosis 
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 HP:0010984 Digenic inheritance "A type of multifactorial inheritance governed by the simultaneous action of two gene loci." [HPO:probinson, ISBN:978-0192628961]
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 HP:0011802 Hamartoma of tongue 
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0012531 Pain "An unpleasant sensory and emotional experience associated with actual or potential tissue damage, or described in terms of such damage." [ORCID:0000-0001-5208-3432]
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 HP:0030195 Fatigable weakness of swallowing muscles "A type of weakness of the muscles involved in swallowing that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [pmid:17986328, UK:rheller]
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 HP:0030196 Fatigable weakness of respiratory muscles "A type of weakness of the muscles involved in breathing (respiration) that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [UNCL:mbertoli]
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 HP:0100732 Pancreatic fibrosis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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