ENSG00000117650


Homo sapiens

Features
Gene ID: ENSG00000117650
  
Biological name :NEK2
  
Synonyms : NEK2 / NIMA related kinase 2 / P51955
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q32.3
Gene start: 211658657
Gene end: 211675630
  
Corresponding Affymetrix probe sets: 204641_at (Human Genome U133 Plus 2.0 Array)   211080_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355965
Ensembl peptide - ENSP00000355966
Ensembl peptide - ENSP00000440237
NCBI entrez gene - 4751     See in Manteia.
OMIM - 604043
RefSeq - XM_005273147
RefSeq - NM_001204182
RefSeq - NM_001204183
RefSeq - NM_002497
RefSeq Peptide - NP_001191111
RefSeq Peptide - NP_001191112
RefSeq Peptide - NP_002488
swissprot - P51955
swissprot - F6U4U2
Ensembl - ENSG00000117650
  
Related genetic diseases (OMIM): 615565 - ?Retinitis pigmentosa 67, 615565
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nek2ENSDARG00000005619Danio rerio
 NEK2ENSGALG00000009854Gallus gallus
 Nek2ENSMUSG00000026622Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NEK1 / Q96PY6 / NIMA related kinase 1ENSG0000013760131
NEK5 / Q6P3R8 / NIMA related kinase 5ENSG0000019716831
NEK4 / P51957 / NIMA related kinase 4ENSG0000011490430
NEK3 / P51956 / NIMA related kinase 3ENSG0000013609830
NEK11 / Q8NG66 / NIMA related kinase 11ENSG0000011467028
NEK9 / Q8TD19 / NIMA related kinase 9ENSG0000011963828
NEK8 / Q86SG6 / NIMA related kinase 8ENSG0000016060227
NEK6 / Q9HC98 / NIMA related kinase 6ENSG0000011940823
NEK7 / Q8TDX7 / NIMA related kinase 7ENSG0000015141422


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000070 mitotic sister chromatid segregation IEA
 biological_processGO:0000086 G2/M transition of mitotic cell cycle TAS
 biological_processGO:0000278 mitotic cell cycle TAS
 biological_processGO:0001824 blastocyst development IEA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007059 chromosome segregation IEA
 biological_processGO:0007088 regulation of mitotic nuclear division TAS
 biological_processGO:0010389 regulation of G2/M transition of mitotic cell cycle TAS
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0032212 positive regulation of telomere maintenance via telomerase IMP
 biological_processGO:0043392 negative regulation of DNA binding IEA
 biological_processGO:0046602 regulation of mitotic centrosome separation TAS
 biological_processGO:0046777 protein autophosphorylation IMP
 biological_processGO:0051225 spindle assembly TAS
 biological_processGO:0051299 centrosome separation IDA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051321 meiotic cell cycle IEA
 biological_processGO:0051973 positive regulation of telomerase activity IMP
 biological_processGO:0051988 regulation of attachment of spindle microtubules to kinetochore IMP
 biological_processGO:0090307 mitotic spindle assembly IEA
 biological_processGO:0097711 ciliary basal body-plasma membrane docking TAS
 biological_processGO:1903126 negative regulation of centriole-centriole cohesion IMP
 biological_processGO:1904355 positive regulation of telomere capping IMP
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0000777 condensed chromosome kinetochore IEA
 cellular_componentGO:0000794 condensed nuclear chromosome IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0030496 midbody IEA
 cellular_componentGO:0032991 protein-containing complex IMP
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019903 protein phosphatase binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
APC-Cdc20 mediated degradation of Nek2A
Regulation of PLK1 Activity at G2/M Transition
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Anchoring of the basal body to the plasma membrane
AURKA Activation by TPX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000842 Hyperinsulinemia 
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 HP:0000987 Scarring 
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 HP:0001249 Mental retardation 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0007675 Progressive night blindness 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0008736 Hypoplasia of penis 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000117399 CDC20 / Q12834 / cell division cycle 20  / reaction / complex
 ENSG00000156970 BUB1B / O60566 / BUB1 mitotic checkpoint serine/threonine kinase B  / complex / reaction
 ENSG00000164109 MAD2L1 / Q13257 / mitotic arrest deficient 2 like 1  / reaction / complex
 ENSG00000154473 BUB3 / O43684 / BUB3, mitotic checkpoint protein  / complex / reaction






 

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