ENSG00000139832


Homo sapiens

Features
Gene ID: ENSG00000139832
  
Biological name :RAB20
  
Synonyms : Q9NX57 / RAB20 / RAB20, member RAS oncogene family
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q34
Gene start: 110523066
Gene end: 110561733
  
Corresponding Affymetrix probe sets: 219622_at (Human Genome U133 Plus 2.0 Array)   237373_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000267328
NCBI entrez gene - 55647     See in Manteia.
RefSeq - NM_017817
RefSeq Peptide - NP_060287
swissprot - Q9NX57
Ensembl - ENSG00000139832
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab20ENSDARG00000005049Danio rerio
 RAB20ENSGALG00000016844Gallus gallus
 Rab20ENSMUSG00000031504Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAB5B / P61020 / RAB5B, member RAS oncogene familyENSG0000011154029
RAB5A / P20339 / RAB5A, member RAS oncogene familyENSG0000014456629
RAB5C / P51148 / RAB5C, member RAS oncogene familyENSG0000010877428
RAB21 / Q9UL25 / RAB21, member RAS oncogene familyENSG0000008037127
RAB17 / Q9H0T7 / RAB17, member RAS oncogene familyENSG0000012483926
Q9UL26 / RAB22A / RAB22A, member RAS oncogene familyENSG0000012420926
RAB31 / Q13636 / RAB31, member RAS oncogene familyENSG0000016846126
AC099811.2ENSG0000026726124
Q9NZQ0 / DNAJC27 / DnaJ heat shock protein family (Hsp40) member C27ENSG0000011513720


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030100 regulation of endocytosis IBA
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 biological_processGO:0090383 phagosome acidification IMP
 biological_processGO:0090385 phagosome-lysosome fusion IMP
 cellular_componentGO:0005769 early endosome IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030670 phagocytic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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