ENSG00000140993


Homo sapiens

Features
Gene ID: ENSG00000140993
  
Biological name :TIGD7
  
Synonyms : Q6NT04 / TIGD7 / tigger transposable element derived 7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p13.3
Gene start: 3298832
Gene end: 3305729
  
Corresponding Affymetrix probe sets: 224365_s_at (Human Genome U133 Plus 2.0 Array)   238793_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000380071
Ensembl peptide - ENSP00000459534
NCBI entrez gene - 91151     See in Manteia.
OMIM - 612969
RefSeq - NM_033208
RefSeq Peptide - NP_149985
swissprot - Q6NT04
swissprot - I3L2A8
Ensembl - ENSG00000140993
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
JRKL / Q9Y4A0 / JRK likeENSG0000018334028
TIGD2 / Q4W5G0 / tigger transposable element derived 2ENSG0000018034628
JRK / Jrk helix-turn-helix proteinENSG0000023461627
TIGD1 / Q96MW7 / tigger transposable element derived 1ENSG0000022194424
TIGD6 / Q17RP2 / tigger transposable element derived 6ENSG0000016429623
TIGD5 / Q53EQ6 / tigger transposable element derived 5ENSG0000017988622
TIGD4 / Q8IY51 / tigger transposable element derived 4ENSG0000016998921
CENPB / P07199 / centromere protein BENSG0000012581719
TIGD3 / Q6B0B8 / tigger transposable element derived 3ENSG0000017382515


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr