ENSG00000180346


Homo sapiens

Features
Gene ID: ENSG00000180346
  
Biological name :TIGD2
  
Synonyms : Q4W5G0 / TIGD2 / tigger transposable element derived 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q22.1
Gene start: 89111500
Gene end: 89114899
  
Corresponding Affymetrix probe sets: 229983_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000317170
Ensembl peptide - ENSP00000486687
NCBI entrez gene - 166815     See in Manteia.
OMIM - 612973
RefSeq - NM_145715
RefSeq Peptide - NP_663761
swissprot - Q4W5G0
swissprot - V9HWD1
Ensembl - ENSG00000180346
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Tigd2ENSMUSG00000049232Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
JRKL / Q9Y4A0 / JRK likeENSG0000018334062
JRK / Jrk helix-turn-helix proteinENSG0000023461632
TIGD7 / Q6NT04 / tigger transposable element derived 7ENSG0000014099329
TIGD1 / Q96MW7 / tigger transposable element derived 1ENSG0000022194427
TIGD5 / Q53EQ6 / tigger transposable element derived 5ENSG0000017988627
TIGD4 / Q8IY51 / tigger transposable element derived 4ENSG0000016998922
CENPB / P07199 / centromere protein BENSG0000012581721
TIGD6 / Q17RP2 / tigger transposable element derived 6ENSG0000016429621
TIGD3 / Q6B0B8 / tigger transposable element derived 3ENSG0000017382516


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr