ENSG00000183340


Homo sapiens

Features
Gene ID: ENSG00000183340
  
Biological name :JRKL
  
Synonyms : JRKL / JRK like / Q9Y4A0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q21
Gene start: 96389989
Gene end: 96507574
  
Corresponding Affymetrix probe sets: 1557790_at (Human Genome U133 Plus 2.0 Array)   206734_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000333350
NCBI entrez gene - 8690     See in Manteia.
OMIM - 603211
RefSeq - NM_003772
RefSeq - NM_001261833
RefSeq Peptide - NP_001248762
RefSeq Peptide - NP_003763
swissprot - Q9Y4A0
Ensembl - ENSG00000183340
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 JrklENSMUSG00000079083Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TIGD2 / Q4W5G0 / tigger transposable element derived 2ENSG0000018034662
JRK / Jrk helix-turn-helix proteinENSG0000023461634
TIGD7 / Q6NT04 / tigger transposable element derived 7ENSG0000014099330
TIGD5 / Q53EQ6 / tigger transposable element derived 5ENSG0000017988629
TIGD1 / Q96MW7 / tigger transposable element derived 1ENSG0000022194427
TIGD4 / Q8IY51 / tigger transposable element derived 4ENSG0000016998924
CENPB / P07199 / centromere protein BENSG0000012581722
TIGD6 / Q17RP2 / tigger transposable element derived 6ENSG0000016429622
TIGD3 / Q6B0B8 / tigger transposable element derived 3ENSG0000017382517


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007417 central nervous system development TAS
 cellular_componentGO:0005634 nucleus TAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr