ENSG00000164296


Homo sapiens

Features
Gene ID: ENSG00000164296
  
Biological name :TIGD6
  
Synonyms : Q17RP2 / TIGD6 / tigger transposable element derived 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q32
Gene start: 149993118
Gene end: 150001167
  
Corresponding Affymetrix probe sets: 220986_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000296736
Ensembl peptide - ENSP00000425318
NCBI entrez gene - 81789     See in Manteia.
RefSeq - NM_030953
RefSeq - NM_001243253
RefSeq Peptide - NP_001230182
RefSeq Peptide - NP_112215
swissprot - Q17RP2
Ensembl - ENSG00000164296
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TIGD4 / Q8IY51 / tigger transposable element derived 4ENSG0000016998929
CENPB / P07199 / centromere protein BENSG0000012581726
TIGD1 / Q96MW7 / tigger transposable element derived 1ENSG0000022194424
TIGD7 / Q6NT04 / tigger transposable element derived 7ENSG0000014099324
JRKL / Q9Y4A0 / JRK likeENSG0000018334022
TIGD3 / Q6B0B8 / tigger transposable element derived 3ENSG0000017382521
TIGD2 / Q4W5G0 / tigger transposable element derived 2ENSG0000018034621
TIGD5 / Q53EQ6 / tigger transposable element derived 5ENSG0000017988620
JRK / Jrk helix-turn-helix proteinENSG0000023461620


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily
 IPR036388  Winged helix-like DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr