ENSG00000169989


Homo sapiens

Features
Gene ID: ENSG00000169989
  
Biological name :TIGD4
  
Synonyms : Q8IY51 / TIGD4 / tigger transposable element derived 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: q31.3
Gene start: 152769354
Gene end: 152779764
  
Corresponding Affymetrix probe sets: 1552522_at (Human Genome U133 Plus 2.0 Array)   1552523_a_at (Human Genome U133 Plus 2.0 Array)   232998_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355162
NCBI entrez gene - 201798     See in Manteia.
RefSeq - NM_145720
RefSeq - XM_005262807
RefSeq Peptide - NP_663772
swissprot - Q8IY51
Ensembl - ENSG00000169989
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Tigd4ENSMUSG00000047819Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CENPB / P07199 / centromere protein BENSG0000012581729
TIGD6 / Q17RP2 / tigger transposable element derived 6ENSG0000016429629
TIGD3 / Q6B0B8 / tigger transposable element derived 3ENSG0000017382526
JRKL / Q9Y4A0 / JRK likeENSG0000018334024
TIGD1 / Q96MW7 / tigger transposable element derived 1ENSG0000022194423
JRK / Jrk helix-turn-helix proteinENSG0000023461623
TIGD7 / Q6NT04 / tigger transposable element derived 7ENSG0000014099323
TIGD2 / Q4W5G0 / tigger transposable element derived 2ENSG0000018034622
TIGD5 / Q53EQ6 / tigger transposable element derived 5ENSG0000017988621


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr