ENSG00000221944


Homo sapiens

Features
Gene ID: ENSG00000221944
  
Biological name :TIGD1
  
Synonyms : Q96MW7 / TIGD1 / tigger transposable element derived 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q37.1
Gene start: 232547968
Gene end: 232550592
  
Corresponding Affymetrix probe sets: 1553099_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386186
NCBI entrez gene - 200765     See in Manteia.
OMIM - 612972
RefSeq - NM_145702
RefSeq Peptide - NP_663748
swissprot - Q96MW7
Ensembl - ENSG00000221944
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TIGD2 / Q4W5G0 / tigger transposable element derived 2ENSG0000018034624
JRKL / Q9Y4A0 / JRK likeENSG0000018334024
TIGD7 / Q6NT04 / tigger transposable element derived 7ENSG0000014099322
JRK / Jrk helix-turn-helix proteinENSG0000023461622
TIGD6 / Q17RP2 / tigger transposable element derived 6ENSG0000016429621
TIGD4 / Q8IY51 / tigger transposable element derived 4ENSG0000016998920
TIGD5 / Q53EQ6 / tigger transposable element derived 5ENSG0000017988619
CENPB / P07199 / centromere protein BENSG0000012581717
TIGD3 / Q6B0B8 / tigger transposable element derived 3ENSG0000017382515


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr