ENSG00000173825


Homo sapiens

Features
Gene ID: ENSG00000173825
  
Biological name :TIGD3
  
Synonyms : Q6B0B8 / TIGD3 / tigger transposable element derived 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q13.1
Gene start: 65354767
Gene end: 65357613
  
Corresponding Affymetrix probe sets: 229789_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000308354
NCBI entrez gene - 220359     See in Manteia.
RefSeq - NM_145719
RefSeq Peptide - NP_663771
swissprot - Q6B0B8
Ensembl - ENSG00000173825
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043930Gallus gallus
 Tigd3ENSMUSG00000044390Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TIGD4 / Q8IY51 / tigger transposable element derived 4ENSG0000016998929
CENPB / P07199 / centromere protein BENSG0000012581726
TIGD6 / Q17RP2 / tigger transposable element derived 6ENSG0000016429623
JRK / Jrk helix-turn-helix proteinENSG0000023461620
TIGD5 / Q53EQ6 / tigger transposable element derived 5ENSG0000017988620
JRKL / Q9Y4A0 / JRK likeENSG0000018334019
TIGD1 / Q96MW7 / tigger transposable element derived 1ENSG0000022194418
TIGD7 / Q6NT04 / tigger transposable element derived 7ENSG0000014099317
TIGD2 / Q4W5G0 / tigger transposable element derived 2ENSG0000018034617


Protein motifs (from Interpro)
Interpro ID Name
 IPR004875  DDE superfamily endonuclease domain
 IPR006600  HTH CenpB-type DNA-binding domain
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr