ENSG00000151962


Homo sapiens

Features
Gene ID: ENSG00000151962
  
Biological name :RBM46
  
Synonyms : Q8TBY0 / RBM46 / RNA binding motif protein 46
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q32.1
Gene start: 154781213
Gene end: 154828813
  
Corresponding Affymetrix probe sets: 242516_x_at (Human Genome U133 Plus 2.0 Array)   244351_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000426672
Ensembl peptide - ENSP00000281722
Ensembl peptide - ENSP00000422813
Ensembl peptide - ENSP00000424500
NCBI entrez gene - 166863     See in Manteia.
RefSeq - XM_011531697
RefSeq - NM_001277171
RefSeq - NM_001277173
RefSeq - NM_144979
RefSeq - XM_011531692
RefSeq - XM_011531693
RefSeq - XM_011531694
RefSeq - XM_011531695
RefSeq - XM_011531696
RefSeq - XM_006714119
RefSeq - XM_006714120
RefSeq Peptide - NP_001264100
RefSeq Peptide - NP_001264102
RefSeq Peptide - NP_659416
swissprot - Q8TBY0
swissprot - D6RF41
Ensembl - ENSG00000151962
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm46ENSDARG00000079452Danio rerio
 RBM46ENSGALG00000009278Gallus gallus
 Rbm46ENSMUSG00000033882Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A1CF / Q9NQ94 / APOBEC1 complementation factorENSG0000014858450
RBM47 / A0AV96 / RNA binding motif protein 47ENSG0000016369448
HNRNPR / O43390 / heterogeneous nuclear ribonucleoprotein RENSG0000012594436
O60506 / SYNCRIP / synaptotagmin binding cytoplasmic RNA interacting proteinENSG0000013531635
DND1 / Q8IYX4 / DND microRNA-mediated repression inhibitor 1ENSG0000025645321


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006535  HnRNP R/Q splicing factor
 IPR034434  Probable RNA-binding protein 46, RNA recognition motif 1
 IPR034435  Probable RNA-binding protein 46, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001829 trophectodermal cell differentiation IEA
 biological_processGO:0048255 mRNA stabilization IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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