ENSG00000163694


Homo sapiens

Features
Gene ID: ENSG00000163694
  
Biological name :RBM47
  
Synonyms : A0AV96 / RBM47 / RNA binding motif protein 47
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: p14
Gene start: 40423267
Gene end: 40630875
  
Corresponding Affymetrix probe sets: 218035_s_at (Human Genome U133 Plus 2.0 Array)   222496_s_at (Human Genome U133 Plus 2.0 Array)   229421_s_at (Human Genome U133 Plus 2.0 Array)   229439_s_at (Human Genome U133 Plus 2.0 Array)   229440_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000371214
Ensembl peptide - ENSP00000421589
Ensembl peptide - ENSP00000426542
Ensembl peptide - ENSP00000425507
Ensembl peptide - ENSP00000425111
Ensembl peptide - ENSP00000424019
Ensembl peptide - ENSP00000423527
Ensembl peptide - ENSP00000423398
Ensembl peptide - ENSP00000423243
Ensembl peptide - ENSP00000422945
Ensembl peptide - ENSP00000422564
Ensembl peptide - ENSP00000295971
Ensembl peptide - ENSP00000371212
NCBI entrez gene - 54502     See in Manteia.
RefSeq - XM_017008310
RefSeq - XM_005248107
RefSeq - XM_005248108
RefSeq - XM_005248109
RefSeq - XM_011513704
RefSeq - XM_011513707
RefSeq - XM_011513708
RefSeq - XM_017008304
RefSeq - XM_017008305
RefSeq - XM_017008306
RefSeq - XM_017008307
RefSeq - XM_017008308
RefSeq - XM_017008309
RefSeq - NM_001098634
RefSeq - NM_019027
RefSeq - XM_005248103
RefSeq Peptide - NP_061900
RefSeq Peptide - NP_001092104
swissprot - D6RCT1
swissprot - D6RBS9
swissprot - D6RBP6
swissprot - D6RA49
swissprot - D6RFL5
swissprot - D6R9D6
swissprot - B7Z8Z7
swissprot - A0AV96
swissprot - D6R9M7
swissprot - D6REZ6
Ensembl - ENSG00000163694
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm47ENSDARG00000061985Danio rerio
 RBM47ENSGALG00000014267Gallus gallus
 Rbm47ENSMUSG00000070780Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A1CF / Q9NQ94 / APOBEC1 complementation factorENSG0000014858446
RBM46 / Q8TBY0 / RNA binding motif protein 46ENSG0000015196243
HNRNPR / O43390 / heterogeneous nuclear ribonucleoprotein RENSG0000012594436
O60506 / SYNCRIP / synaptotagmin binding cytoplasmic RNA interacting proteinENSG0000013531635
DND1 / Q8IYX4 / DND microRNA-mediated repression inhibitor 1ENSG0000025645318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006535  HnRNP R/Q splicing factor
 IPR034440  Putative RNA-binding protein 47, RNA recognition motif 2
 IPR034442  Putative RNA-binding protein 47
 IPR034445  Putative RNA-binding protein 47, RNA recognition motif 3
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IEA
 biological_processGO:0016554 cytidine to uridine editing IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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