ENSGALG00000014267


Gallus gallus

Features
Gene ID: ENSGALG00000014267
  
Biological name :RBM47
  
Synonyms : RBM47 / RNA binding motif protein 47
  
Possible biological names infered from orthology : A0AV96 / Q91WT8 / RNA-binding protein 47
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 69357333
Gene end: 69363626
  
Corresponding Affymetrix probe sets: GgaAffx.9058.1.S1_at (Chicken Array)   GgaAffx.9058.2.S1_at (Chicken Array)   GgaAffx.9058.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023036
Ensembl peptide - ENSGALP00000053358
NCBI entrez gene - 770355     See in Manteia.
RefSeq - XM_015285455
RefSeq - XM_004936111
RefSeq - XM_015285454
RefSeq - XM_003641244
RefSeq - XM_004936107
RefSeq - XM_004936108
RefSeq - XM_004936109
swissprot - E1BVJ9
swissprot - A0A1D5PKJ9
Ensembl - ENSGALG00000014267
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm47ENSDARG00000061985Danio rerio
 RBM47ENSG00000163694Homo sapiens
 Rbm47ENSMUSG00000070780Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A1CF / APOBEC1 complementation factor / Q5YD48* / Q9NQ94*ENSGALG0000000376548
RBM46 / RNA binding motif protein 46 / P86049* / Q8TBY0* / Probable RNA-binding protein 46 *ENSGALG0000000927835
HNRNPR / heterogeneous nuclear ribonucleoprotein R / O43390* / heteroous nuclear ribonucleoprotein R isoform a *ENSGALG0000000081435
SYNCRIP / heterogeneous nuclear ribonucleoprotein Q / O60506* / Q7TMK9* / synaptotagmin binding cytoplasmic RNA interacting protein*ENSGALG0000001583033


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006535  HnRNP R/Q splicing factor
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IEA
 biological_processGO:0016554 cytidine to uridine editing IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr