ENSG00000157542


Homo sapiens

Features
Gene ID: ENSG00000157542
  
Biological name :KCNJ6
  
Synonyms : KCNJ6 / P48051 / potassium voltage-gated channel subfamily J member 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: -1
Band: q22.13
Gene start: 37607376
Gene end: 38121345
  
Corresponding Affymetrix probe sets: 210454_s_at (Human Genome U133 Plus 2.0 Array)   232411_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000493772
Ensembl peptide - ENSP00000477437
NCBI entrez gene - 3763     See in Manteia.
OMIM - 600877
RefSeq - NM_002240
RefSeq Peptide - NP_002231
swissprot - P48051
Ensembl - ENSG00000157542
  
Related genetic diseases (OMIM): 614098 - Keppen-Lubinsky syndrome, 614098
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCNJ6ENSDARG00000058985Danio rerio
 KCNJ6ENSGALG00000016054Gallus gallus
 Kcnj6ENSMUSG00000043301Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KCNJ5 / P48544 / potassium voltage-gated channel subfamily J member 5ENSG0000012045770
KCNJ9 / Q92806 / potassium voltage-gated channel subfamily J member 9ENSG0000016272865
KCNJ3 / P48549 / potassium voltage-gated channel subfamily J member 3ENSG0000016298953
KCNJ2 / P63252 / potassium voltage-gated channel subfamily J member 2ENSG0000012370045
KCNJ12 / Q14500 / potassium voltage-gated channel subfamily J member 12ENSG0000018418544
KCNJ4 / P48050 / potassium voltage-gated channel subfamily J member 4ENSG0000016813544
B7U540 / KCNJ18 / potassium voltage-gated channel subfamily J member 18ENSG0000026045843
KCNJ11 / Q14654 / potassium voltage-gated channel subfamily J member 11ENSG0000018748640
KCNJ8 / Q15842 / potassium voltage-gated channel subfamily J member 8ENSG0000012136140
KCNJ14 / Q9UNX9 / potassium voltage-gated channel subfamily J member 14ENSG0000018232440
KCNJ1 / P48048 / potassium voltage-gated channel subfamily J member 1ENSG0000015170435
KCNJ10 / P78508 / potassium voltage-gated channel subfamily J member 10ENSG0000017780732
KCNJ15 / Q99712 / potassium voltage-gated channel subfamily J member 15ENSG0000015755130


Protein motifs (from Interpro)
Interpro ID Name
 IPR003275  Potassium channel, inwardly rectifying, Kir3.2
 IPR013518  Potassium channel, inwardly rectifying, Kir, cytoplasmic
 IPR014756  Immunoglobulin E-set
 IPR016449  Potassium channel, inwardly rectifying, Kir


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0010107 potassium ion import IBA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 cellular_componentGO:0005794 Golgi apparatus HDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0008076 voltage-gated potassium channel complex TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005242 inward rectifier potassium channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015467 G-protein activated inward rectifier potassium channel activity IEA


Pathways (from Reactome)
Pathway description
Activation of G protein gated Potassium channels
Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000194 Open mouth 
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 HP:0000212 Gingival hyperplasia 
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000290 Abnormality of the forehead 
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 HP:0000292 Loss of facial adipose tissue "Loss of normal subcutaneous fat tissue in the face." [HPO:curators]
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 HP:0000298 Mask-like facies 
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 HP:0000322 Short philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000446 Narrow nasal bridge 
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 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
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 HP:0000520 Proptosis 
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 HP:0000586 Shallow orbits 
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 HP:0001090 Large eyes 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001285 Spastic tetraparesis "Spastic weakness affecting all four limbs." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001508 Failure to thrive 
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 HP:0001561 Polyhydramnios 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002094 Dyspnea 
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 HP:0002179 Opisthotonus 
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 HP:0002187 Mental retardation, profound "Severe mental retardation is defined as an intelligence quotient (IQ) below 20." [HPO:curators]
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 HP:0002373 Febrile seizures "Febrile seizures are convulsions induced by a fever in infants or small children and are generally characterized by loss of consciousness and tonic-clonic movements. Most febrile seizures last a minute or two." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002659 Increased susceptibility to fractures "An abnormally increased tendency to fractures of bones caused by an abnormal reduction in bone strength that is generally associated with an increased risk of fracture." [HPO:sdoelken]
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 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
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 HP:0002781 Upper airway obstruction 
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 HP:0005274 Prominent nasal tip 
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 HP:0005328 Progeroid facial appearance 
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 HP:0006532 Pneumonia, recurrent episodes 
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 HP:0007485 Absence of subcutaneous fat 
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 HP:0008734 Decreased testicular size 
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 HP:0008897 Growth retardation, progressive 
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 HP:0009059 Congenital generalized lipodystrophy 
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 HP:0009064 Generalized lipodystrophy "Generalized degenerative changes of the fat tissue." [HPO:curators]
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 HP:0009933 Naris, narrow "Slender, slit-like aperture of the `nostril` (FMA:59645)." [HPO:curators]
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 HP:0010751 Chin dimple "A persistent midline depression of the skin over the fat pad of the chin." [pmid:19125436]
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 HP:0010804 Tented upper lip vermilion "Triangular appearance of the oral aperture with the apex in the midpoint of the upper vermilion and the lower vermilion forming the base." [pmid:19125428]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011344 Severe global developmental delay "A severe delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
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 HP:0100678 Wrinkled skin 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000162989 KCNJ3 / P48549 / potassium voltage-gated channel subfamily J member 3  / complex
 ENSG00000120457 KCNJ5 / P48544 / potassium voltage-gated channel subfamily J member 5  / complex
 ENSG00000162728 KCNJ9 / Q92806 / potassium voltage-gated channel subfamily J member 9  / complex
 ENSG00000172354 GNB2 / P62879 / G protein subunit beta 2  / complex
 ENSG00000204681 GABBR1 / Q9UBS5 / gamma-aminobutyric acid type B receptor subunit 1  / complex
 ENSG00000078369 GNB1 / P62873 / G protein subunit beta 1  / complex
 ENSG00000111664 GNB3 / P16520 / G protein subunit beta 3  / complex
 ENSG00000136928 GABBR2 / O75899 / gamma-aminobutyric acid type B receptor subunit 2  / complex
 ENSG00000157542 KCNJ6 / P48051 / potassium voltage-gated channel subfamily J member 6  / complex






 

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