ENSG00000169851


Homo sapiens

Features
Gene ID: ENSG00000169851
  
Biological name :PCDH7
  
Synonyms : O60245 / PCDH7 / protocadherin 7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: p15.1
Gene start: 30720415
Gene end: 31146805
  
Corresponding Affymetrix probe sets: 205534_at (Human Genome U133 Plus 2.0 Array)   205535_s_at (Human Genome U133 Plus 2.0 Array)   210273_at (Human Genome U133 Plus 2.0 Array)   210941_at (Human Genome U133 Plus 2.0 Array)   228640_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000484874
Ensembl peptide - ENSP00000427066
Ensembl peptide - ENSP00000441802
Ensembl peptide - ENSP00000483285
Ensembl peptide - ENSP00000355243
NCBI entrez gene - 5099     See in Manteia.
OMIM - 602988
RefSeq - XM_017008272
RefSeq - NM_001173523
RefSeq - NM_002589
RefSeq - NM_032456
RefSeq - NM_032457
RefSeq - XM_005248163
RefSeq - XM_005248164
RefSeq - XM_011513844
RefSeq Peptide - NP_001166994
RefSeq Peptide - NP_115832
RefSeq Peptide - NP_115833
RefSeq Peptide - NP_002580
swissprot - A0A087X0C9
swissprot - A0A087X2C4
swissprot - H0YAH0
swissprot - O60245
Ensembl - ENSG00000169851
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh7bENSDARG00000060610Danio rerio
 PCDH7ENSGALG00000033883Gallus gallus
 Pcdh7ENSMUSG00000029108Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PCDH1 / Q08174 / protocadherin 1ENSG0000015645349
PCDH9 / Q9HC56 / protocadherin 9ENSG0000018422639
Q9BZA8 / PCDH11Y / protocadherin 11 Y-linkedENSG0000009971536
Q9BZA7 / PCDH11X / protocadherin 11 X-linkedENSG0000010229036
PCDH20 / Q8N6Y1 / protocadherin 20ENSG0000028016528
AL592490.1ENSG0000019799128
PCDHA3 / Q9Y5H8 / protocadherin alpha 3ENSG0000025540826
PCDHA6 / Q9UN73 / protocadherin alpha 6ENSG0000008184225
PCDHA8 / Q9Y5H6 / protocadherin alpha 8ENSG0000020496225
Q9Y5I2 / PCDHA10 / protocadherin alpha 10ENSG0000025012025
PCDHA4 / Q9UN74 / protocadherin alpha 4ENSG0000020496725
PCDHA2 / Q9Y5H9 / protocadherin alpha 2ENSG0000020496924
Q9UN75 / PCDHA12 / protocadherin alpha 12ENSG0000025166424
PCDHA7 / Q9UN72 / protocadherin alpha 7ENSG0000020496324
Q9Y5I0 / PCDHA13 / protocadherin alpha 13ENSG0000023938924
PCDHA1 / Q9Y5I3 / protocadherin alpha 1ENSG0000020497024
Q9Y5I1 / PCDHA11 / protocadherin alpha 11ENSG0000024915824
PCDHA5 / Q9Y5H7 / protocadherin alpha 5ENSG0000020496524
PCDHA9 / Q9Y5H5 / protocadherin alpha 9ENSG0000020496123
PCDH15 / Q96QU1 / protocadherin related 15ENSG0000015027522


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR013585  Protocadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002576 platelet degranulation TAS
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031092 platelet alpha granule membrane TAS
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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