ENSG00000102290


Homo sapiens

Features
Gene ID: ENSG00000102290
  
Biological name :PCDH11X
  
Synonyms : PCDH11X / protocadherin 11 X-linked / Q9BZA7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q21.31
Gene start: 91779261
Gene end: 92623230
  
Corresponding Affymetrix probe sets: 1557880_at (Human Genome U133 Plus 2.0 Array)   208366_at (Human Genome U133 Plus 2.0 Array)   210292_s_at (Human Genome U133 Plus 2.0 Array)   211227_s_at (Human Genome U133 Plus 2.0 Array)   217049_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000423762
Ensembl peptide - ENSP00000355105
Ensembl peptide - ENSP00000362180
Ensembl peptide - ENSP00000362186
Ensembl peptide - ENSP00000362189
Ensembl peptide - ENSP00000384758
NCBI entrez gene - 27328     See in Manteia.
OMIM - 300246
RefSeq - XM_017029420
RefSeq - NM_001168360
RefSeq - NM_001168361
RefSeq - NM_001168362
RefSeq - NM_001168363
RefSeq - NM_032968
RefSeq - NM_032969
RefSeq - XM_011530912
RefSeq - XM_011530913
RefSeq - XM_011530914
RefSeq - XM_017029416
RefSeq - XM_017029417
RefSeq - XM_017029418
RefSeq - XM_017029419
RefSeq - XM_011530910
RefSeq - XM_011530911
RefSeq Peptide - NP_116750
RefSeq Peptide - NP_001161834
RefSeq Peptide - NP_001161835
RefSeq Peptide - NP_001161833
RefSeq Peptide - NP_116751
RefSeq Peptide - NP_001161832
swissprot - Q9BZA7
Ensembl - ENSG00000102290
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh11ENSDARG00000098652Danio rerio
 ENSGALG00000006851Gallus gallus
 Pcdh11xENSMUSG00000034755Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BZA8 / PCDH11Y / protocadherin 11 Y-linkedENSG0000009971574
PCDH9 / Q9HC56 / protocadherin 9ENSG0000018422650
PCDH1 / Q08174 / protocadherin 1ENSG0000015645334
PCDH7 / O60245 / protocadherin 7ENSG0000016985129
AL592490.1ENSG0000019799126
PCDH20 / Q8N6Y1 / protocadherin 20ENSG0000028016526
PCDHA9 / Q9Y5H5 / protocadherin alpha 9ENSG0000020496121
Q9Y5I2 / PCDHA10 / protocadherin alpha 10ENSG0000025012021
PCDHA4 / Q9UN74 / protocadherin alpha 4ENSG0000020496721
PCDHA3 / Q9Y5H8 / protocadherin alpha 3ENSG0000025540821
PCDHA8 / Q9Y5H6 / protocadherin alpha 8ENSG0000020496220
Q9Y5I0 / PCDHA13 / protocadherin alpha 13ENSG0000023938920
PCDHA5 / Q9Y5H7 / protocadherin alpha 5ENSG0000020496520
PCDHA6 / Q9UN73 / protocadherin alpha 6ENSG0000008184220
Q9Y5I1 / PCDHA11 / protocadherin alpha 11ENSG0000024915820
PCDHA7 / Q9UN72 / protocadherin alpha 7ENSG0000020496320
PCDHA2 / Q9Y5H9 / protocadherin alpha 2ENSG0000020496920
PCDHA1 / Q9Y5I3 / protocadherin alpha 1ENSG0000020497020
PCDH15 / Q96QU1 / protocadherin related 15ENSG0000015027519
Q9UN75 / PCDHA12 / protocadherin alpha 12ENSG0000025166419


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR013585  Protocadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0010923 negative regulation of phosphatase activity IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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