ENSMUSG00000034755


Mus musculus

Features
Gene ID: ENSMUSG00000034755
  
Biological name :Pcdh11x
  
Synonyms : Pcdh11x / protocadherin 11 X-linked
  
Possible biological names infered from orthology : PCDH11Y / protocadherin 11 Y-linked / Q9BZA7 / Q9BZA8
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: E2
Gene start: 120290259
Gene end: 120910619
  
Corresponding Affymetrix probe sets: 10601569 (MoGene1.0st)   1436449_at (Mouse Genome 430 2.0 Array)   1438889_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141522
Ensembl peptide - ENSMUSP00000138407
Ensembl peptide - ENSMUSP00000141581
Ensembl peptide - ENSMUSP00000142050
Ensembl peptide - ENSMUSP00000141600
Ensembl peptide - ENSMUSP00000052340
Ensembl peptide - ENSMUSP00000108985
Ensembl peptide - ENSMUSP00000108991
NCBI entrez gene - 245578     See in Manteia.
MGI - MGI:2442849
RefSeq - XM_006528392
RefSeq - NM_001271809
RefSeq - NM_001271810
RefSeq - XM_006528386
RefSeq - XM_006528387
RefSeq - XM_006528388
RefSeq - XM_006528389
RefSeq - XM_006528390
RefSeq Peptide - NP_001258739
RefSeq Peptide - NP_001258738
swissprot - E9Q622
swissprot - B1AZR7
swissprot - F6ZNL5
swissprot - A0JNT1
swissprot - Q2TJH9
swissprot - A0A0A6YWK0
swissprot - Q2TJH7
Ensembl - ENSMUSG00000034755
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh11ENSDARG00000098652Danio rerio
 ENSGALG00000006851Gallus gallus
 Q9BZA7ENSG00000102290Homo sapiens
 Q9BZA8ENSG00000099715Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdh9 / protocadherin 9 / Q9HC56*ENSMUSG0000005542152
Pcdh7 / protocadherin 7 / O60245*ENSMUSG0000002910833
Pcdh1 / protocadherin 1 / Q08174*ENSMUSG0000005137531
Pcdh20 / Q8BIZ0 / Protocadherin-20 / Q8N6Y1* / AL592490.1*ENSMUSG0000005050527
Pcdha8 / protocadherin alpha 8 / Q9Y5H5* / PCDHA7* / PCDHA9* / Q9UN72* / protocadherin alpha 7* / protocadherin alpha 9*ENSMUSG0000010380021
Pcdha1 / protocadherin alpha 1 / Q9Y5I3*ENSMUSG0000010344221
Pcdha11 / protocadherin alpha 11 / Q9Y5I1*ENSMUSG0000010220621
Pcdha9 / Q91Y11 / Protocadherin alpha-9 / Q9Y5I2* / PCDHA10* / protocadherin alpha 10*ENSMUSG0000010377021
Q91Y20 / Pcdha11 / protocadherin alpha 11ENSMUSG0000000744021
O88689 / Pcdha4 / Protocadherin alpha-4 / Q9UN74*ENSMUSG0000010425221
Pcdha6 / Q9UN73* / Q9Y5H6* / PCDHA8* / protocadherin alpha 6* / protocadherin alpha 8*ENSMUSG0000010370721
Q91Y13 / Pcdha7 / Protocadherin alpha-7 / Q9Y5H5* / PCDHA9* / Q9UN72* / protocadherin alpha 9*ENSMUSG0000010431820
Pcdha5 / protocadherin alpha 5 / Q9Y5H7*ENSMUSG0000010309220
Pcdha12 / protocadherin alpha 12 / Q9Y5I0* / PCDHA13* / protocadherin alpha 13*ENSMUSG0000010331020
Pcdh15 / Q99PJ1 / Protocadherin-15 / Q96QU1* / protocadherin related 15*ENSMUSG0000005261319
Pcdhga9ENSMUSG0000010244019
Pcdhgc3 / protocadherin gamma subfamily C, 3ENSMUSG0000010291818


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR013585  Protocadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0010923 negative regulation of phosphatase activity ISO
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr