ENSGALG00000006851


Gallus gallus

Features
Gene ID: ENSGALG00000006851
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : PCDH11X / PCDH11Y / protocadherin 11 X-linked / protocadherin 11 Y-linked / Q9BZA7 / Q9BZA8
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 6599257
Gene end: 7006957
  
Corresponding Affymetrix probe sets: Gga.10205.1.S1_at (Chicken Array)   Gga.82.1.S1_at (Chicken Array)   GgaAffx.4267.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011069
Ensembl peptide - ENSGALP00000043703
Ensembl peptide - ENSGALP00000043506
NCBI entrez gene - 422264     See in Manteia.
RefSeq - XM_004940702
RefSeq - XM_015278495
RefSeq - XM_015278496
RefSeq - XM_420249
swissprot - A0A1D5NTP6
swissprot - A0A1D5NT53
swissprot - E1BVK1
Ensembl - ENSGALG00000006851
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh11ENSDARG00000098652Danio rerio
 Q9BZA7ENSG00000102290Homo sapiens
 Q9BZA8ENSG00000099715Homo sapiens
 Pcdh11xENSMUSG00000034755Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PCDH9 / protocadherin 9 / Q9HC56*ENSGALG0000001690857
PCDH1 / protocadherin-1 precursor / Q08174* / protocadherin 1*ENSGALG0000000255336
PCDH20* / Q8BIZ0* / Q8N6Y1* / AL592490.1* / protocadherin 20*ENSGALG0000001693431
PCDH7 / protocadherin 7 / O60245*ENSGALG0000003388326
PCDH10ENSGALG0000000971923
ENSGALG0000004260621
PCDH15 / Q0ZM14 / Protocadherin-15 / Q99PJ1* / Q96QU1* / protocadherin related 15*ENSGALG0000000274421
PCDHA2 / Gallus gallus protocadherin alpha 12 (PCDHA12), mRNA. / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5...ENSGALG0000004314220
ENSGALG000000239348
Pcdhgc3* / protocadherin gamma subfamily C, 3*ENSGALG000000366297


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR013585  Protocadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr