ENSGALG00000009719


Gallus gallus

Features
Gene ID: ENSGALG00000009719
  
Biological name :PCDH10
  
Synonyms : PCDH10
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 27095819
Gene end: 27127946
  
Corresponding Affymetrix probe sets: Gga.42.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015802
NCBI entrez gene - 408048     See in Manteia.
RefSeq - XM_015285367
RefSeq - NM_214672
RefSeq - XM_015285365
RefSeq - XM_015285366
RefSeq - XM_015285363
RefSeq - XM_015285364
RefSeq Peptide - NP_999837
swissprot - Q90ZT4
Ensembl - ENSGALG00000009719
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh10bENSDARG00000102824Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000004260640
PCDHA2 / Gallus gallus protocadherin alpha 12 (PCDHA12), mRNA. / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5...ENSGALG0000004314235
PCDH1 / protocadherin-1 precursor / Q08174* / protocadherin 1*ENSGALG0000000255328
Q9BZA7* / Q9BZA8* / PCDH11Y* / PCDH11X* / protocadherin 11 X-linked* / protocadherin 11 Y-linked*ENSGALG0000000685127
PCDH9 / protocadherin 9 / Q9HC56*ENSGALG0000001690824
PCDH20* / Q8BIZ0* / Q8N6Y1* / AL592490.1* / protocadherin 20*ENSGALG0000001693421
PCDH15 / Q0ZM14 / Protocadherin-15 / Q99PJ1* / Q96QU1* / protocadherin related 15*ENSGALG0000000274421
PCDH7 / protocadherin 7 / O60245*ENSGALG0000003388319
Pcdhgc3* / protocadherin gamma subfamily C, 3*ENSGALG0000003662912
ENSGALG0000002393410


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030712  Protocadherin-10
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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