ENSG00000184226


Homo sapiens

Features
Gene ID: ENSG00000184226
  
Biological name :PCDH9
  
Synonyms : PCDH9 / protocadherin 9 / Q9HC56
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q21.32
Gene start: 66302834
Gene end: 67230445
  
Corresponding Affymetrix probe sets: 1565602_at (Human Genome U133 Plus 2.0 Array)   219737_s_at (Human Genome U133 Plus 2.0 Array)   219738_s_at (Human Genome U133 Plus 2.0 Array)   238919_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000482917
Ensembl peptide - ENSP00000367096
Ensembl peptide - ENSP00000401699
Ensembl peptide - ENSP00000442186
Ensembl peptide - ENSP00000367092
NCBI entrez gene - 5101     See in Manteia.
OMIM - 603581
RefSeq - XM_017020619
RefSeq - NM_001318372
RefSeq - NM_001318373
RefSeq - NM_001318374
RefSeq - NM_020403
RefSeq - NM_203487
RefSeq - XM_005266408
RefSeq Peptide - NP_001305301
RefSeq Peptide - NP_001305302
RefSeq Peptide - NP_001305303
RefSeq Peptide - NP_065136
RefSeq Peptide - NP_982354
swissprot - A0A087WZW0
swissprot - Q5VT82
swissprot - Q9HC56
swissprot - X5D7N0
swissprot - B7ZM79
Ensembl - ENSG00000184226
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh9ENSDARG00000063264Danio rerio
 PCDH9ENSGALG00000016908Gallus gallus
 Pcdh9ENSMUSG00000055421Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BZA7 / PCDH11X / protocadherin 11 X-linkedENSG0000010229055
Q9BZA8 / PCDH11Y / protocadherin 11 Y-linkedENSG0000009971547
PCDH1 / Q08174 / protocadherin 1ENSG0000015645338
PCDH7 / O60245 / protocadherin 7ENSG0000016985134
AL592490.1ENSG0000019799130
PCDH20 / Q8N6Y1 / protocadherin 20ENSG0000028016530
PCDHA4 / Q9UN74 / protocadherin alpha 4ENSG0000020496723
PCDHA3 / Q9Y5H8 / protocadherin alpha 3ENSG0000025540823
Q9Y5I0 / PCDHA13 / protocadherin alpha 13ENSG0000023938923
PCDHA7 / Q9UN72 / protocadherin alpha 7ENSG0000020496323
PCDHA9 / Q9Y5H5 / protocadherin alpha 9ENSG0000020496122
Q9Y5I2 / PCDHA10 / protocadherin alpha 10ENSG0000025012022
PCDHA6 / Q9UN73 / protocadherin alpha 6ENSG0000008184222
PCDHA1 / Q9Y5I3 / protocadherin alpha 1ENSG0000020497022
Q9Y5I1 / PCDHA11 / protocadherin alpha 11ENSG0000024915822
PCDHA5 / Q9Y5H7 / protocadherin alpha 5ENSG0000020496522
PCDHA2 / Q9Y5H9 / protocadherin alpha 2ENSG0000020496922
Q9UN75 / PCDHA12 / protocadherin alpha 12ENSG0000025166422
PCDHA8 / Q9Y5H6 / protocadherin alpha 8ENSG0000020496222
PCDH15 / Q96QU1 / protocadherin related 15ENSG0000015027521


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR013585  Protocadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0030900 forebrain development IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030426 growth cone IEA
 cellular_componentGO:0044291 cell-cell contact zone IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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