ENSG00000184895


Homo sapiens

Features
Gene ID: ENSG00000184895
  
Biological name :SRY
  
Synonyms : Q05066 / sex determining region Y / SRY
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: Y
Strand: -1
Band: p11.2
Gene start: 2786855
Gene end: 2787699
  
Corresponding Affymetrix probe sets: 207893_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000372547
NCBI entrez gene - 6736     See in Manteia.
OMIM - 480000
RefSeq - NM_003140
RefSeq Peptide - NP_003131
swissprot - A7WPU8
swissprot - Q05066
Ensembl - ENSG00000184895
  
Related genetic diseases (OMIM): 400044 - 46XY sex reversal 1, 400044
  400045 - 46XX sex reversal 1, 400045

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SryENSMUSG00000069036Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SOX3 / P41225 / SRY-box 3ENSG0000013459537
SOX1 / O00570 / SRY-box 1ENSG0000018296836
SOX2 / P48431 / SRY-box 2ENSG0000018144934
SOX15 / O60248 / SRY-box 15ENSG0000012919433
SOX14 / O95416 / SRY-box 14ENSG0000016887532
SOX21 / Q9Y651 / SRY-box 21ENSG0000012528531
SOX9 / P48436 / SRY-box 9ENSG0000012539830
SOX11 / P35716 / SRY-box 11ENSG0000017688727
SOX8 / P57073 / SRY-box 8ENSG0000000551327
SOX10 / P56693 / SRY-box 10ENSG0000010014627
SOX7 / Q9BT81 / SRY-box 7ENSG0000017105627
SOX4 / Q06945 / SRY-box 4ENSG0000012476626
SOX17 / Q9H6I2 / SRY-box 17ENSG0000016473626
SOX18 / P35713 / SRY-box 18ENSG0000020388326
SOX12 / O15370 / SRY-box 12ENSG0000017773224
AC105001.2ENSG0000025872420


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR017253  Transcription factor SRY
 IPR036910  High mobility group box domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007548 sex differentiation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030238 male sex determination NAS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:2000020 positive regulation of male gonad development IDA
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003705 transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0008134 transcription factor binding IPI


Pathways (from Reactome)
Pathway description
Deactivation of the beta-catenin transactivating complex


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000022 Abnormality of male internal genitalia 
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 HP:0000026 Hypogonadism, male "Lack of function of the males gonads (i.e., testes)." [HPO:curators]
Show

 HP:0000027 Azoospermia 
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
Show

 HP:0000030 Gonadoblastoma, male 
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 HP:0000033 Ambiguous genitalia, male 
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 HP:0000037 Male pseudohermaphroditism "Hermaphroditism refers to a discrepancy between the morphology of the gonads and that of the external genitalia. In male pseudohermaphroditism, the genotype is male (XY) and the external genitalia are imcompletely virilized, ambiguous, or complete female. If gonads are present, they are testes." [HPO:curators]
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 HP:0000039 Epispadias "Displacement of the urethral opening on the dorsal (superior) surface of the penis." [HPO:curators]
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 HP:0000041 Chordee "A condition in which the head of the penis curves downward." [HPO:curators]
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 HP:0000044 Hypogonadotrophic hypogonadism "Hypogonadotropic hypogonadism is characterized by reduced function of the gonads (testes in males or ovaries in females) and results from the absence of the gonadal stimulating pituitary hormones: follicle stimulating hormone (FSH) and luteinizing hormone (LH)." [HPO:curators]
Show

 HP:0000045 Abnormality of the scrotum 
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 HP:0000046 Scrotal hypoplasia 
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000048 Bifid scrotum "Separation of the two halves of the scrotum, whereby commonly the 2 halves of the scrotum meet above the penis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000055 Abnormality of female external genitalia 
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 HP:0000058 Abnormality of the labia 
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 HP:0000061 Ambiguous genitalia, female 
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 HP:0000062 Ambiguous genitalia 
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 HP:0000085 Horseshoe kidney 
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 HP:0000098 Increased body height 
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 HP:0000100 Nephrotic syndrome 
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 HP:0000130 Abnormality of the uterus "An abnormality of the uterus (womb)." [HPO:curators]
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 HP:0000133 Gonadal dysgenesis 
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 HP:0000144 Decreased fertility 
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 HP:0000147 polycystic ovaries 
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 HP:0000149 Gonadoblastoma, female 
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 HP:0000150 Gonadoblastoma 
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000403 Recurrent otitis media 
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 HP:0000465 Webbed neck 
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 HP:0000505 Impaired vision 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000729 Pervasive developmental disorder 
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
Show

 HP:0000771 Gynecomastia 
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 HP:0000786 Primary amenorrhea 
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 HP:0000808 Penoscrotal hypospadias "A severe form of hypospadias in which the urethral opening is located at the junction of the penis and scrotum." [HPO:curators]
Show

 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
Show

 HP:0000821 Hypothyroidism 
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 HP:0000823 Delayed puberty 
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 HP:0000837 Elevated gonadotropins 
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 HP:0000846 Adrenal insufficiency 
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 HP:0000868 Decreased fertility in females 
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
Show

 HP:0001087 Congenital glaucoma 
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001450 Y-linked inheritance "A mode of inheritance that is observed for traits related to a gene encoded on the Y chromosome." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001647 Bicuspid aortic valve "The presence of a bicuspid `aortic valve` (FMA:7236)." [HPO:probinson]
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 HP:0001649 Tachycardia "A rapid heartrate that exceeds the range of the normal resting heartrate for age." [HPO:curators]
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 HP:0001657 Prolonged QT interval on EKG 
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 HP:0001680 Coarctation of aorta "Coarctation of the aorta is a narrowing or constriction of the aorta just distal to the origin of the left subclavian artery." [HPO:curators]
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 HP:0001822 Hallux valgus "Lateral deviation of the great toe (i.e., in the direction of the little toe)." [HPO:curators]
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 HP:0002162 Low posterior hairline 
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 HP:0002164 Nail dysplasia 
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 HP:0002215 Sparse axillary hair 
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 HP:0002225 Sparse pubic hair 
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 HP:0002442 Dyscalculia 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002667 Nephroblastoma (Wilms tumor) "A kind of renal tumor primarily affecting children. It is characterized by an abnormal proliferation of the metanephric blastema cells, which are believed to be primitive embryologic cells of the kidney. Clinically, nephroblatoma usually presents as an abdominal mass, and in some cases with abdominal pain, hypertension, hematuria, and fever." [HPO:curators]
Show

 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002967 Cubitus valgus 
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 HP:0003251 Male infertility 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0006610 Wide intermamillary distance 
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 HP:0008187 Absence of secondary sex characteristics 
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 HP:0008193 Primary gonadal insufficiency 
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 HP:0008214 Decreased serum estradiol 
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 HP:0008230 Decreased testosterone in males 
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 HP:0008232 Elevated follicle stimulating hormone 
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 HP:0008665 Hypertrophic clitoris 
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 HP:0008689 Bilateral cryptorchidism 
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 HP:0008715 Testicular dysgenesis 
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 HP:0008726 Hypoplastic vagina "Underdevelopment of the vagina." [HPO:curators]
Show

 HP:0008730 Female external genitalia in males "The presence of female external genitalia in a person with a male karyotype." [HPO:curators]
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 HP:0008734 Decreased testicular size 
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 HP:0008736 Hypoplasia of penis 
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 HP:0008968 Muscle hypertrophy of the lower extremities "Muscle hypertrophy primarily affecting the legs." [HPO:curators]
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 HP:0010044 Hypoplastic/short 4th metacarpal 
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 HP:0010459 True hermaphroditism "The presence of both ovarian and testicular tissues either in the same or in opposite gonads. Affected persons have ambiguous genitalia and may have 46,XX or 46,XY karyotypes or 46,XX/XY mosaicism." [HPO:curators]
Show

 HP:0010464 Streak ovary "A developmental disorder characterized by the progressive loss of primordial germ cells in the developing ovaries of an embryo, leading to hypoplastic ovaries composed of wavy connective tissue with occasional clumps of granulosa cells, and frequenty mesonephric or hilar cells." [HPO:curators]
Show

 HP:0010743 Hypoplasia of the metatarsal bones 
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 HP:0011969 Elevated luteinizing hormone "An elevated concentration of luteinizing hormone in the blood." [HPO:probinson]
Show

 HP:0012244 Abnormal sex determination "Anomaly of primary or secondary sexual development or characteristics." [HPO:probinson, MP:0002210]
Show

 HP:0012245 Sex reversal "Development of the reproductive system is inconsistent with the chromosomal sex." [HPO:probinson, MP:0005652]
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 HP:0012741 Unilateral cryptorchidism "Absence of a testis from the scrotum on one side owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:probinson]
Show

 HP:0012856 Abnormal scrotal rugation "Anomaly of the folded ridges (wrinkles) of skin of the scrotum." [HPO:probinson]
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 HP:0012861 Ovotestis "A gonad that contains both ovarian follicles and testicular tubular elements." [HPO:probinson]
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 HP:0012870 Vanishing testis "A condition which is considered to be due to the subsequent atrophy and disappearance in fetal life of an initially normal testis. In the presence of spermatic cord structures is evidence of the presence of the testis in early intrauterine life. When associated with a blind-ending spermatic cord, this entity is named as his absence of a testis in an otherwise normal 46XY male is usually unilateral and is assumed to be a consequence of intrauterine or perinatal torsion or infarction." [HPO:probinson, pmid:22985611]
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 HP:0012887 Ovarian serous cystadenoma "A cystic tumor of the ovary, containing thin, clear, yellow serous fluid and varying amounts of solid tissue." [HPO:probinson, PMID:23766763]
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 HP:0030079 Cervix cancer "A tumor of the uterine cervix." []
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0040171 Decreased serum testosterone level 
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 HP:0100779 Urogenital sinus anomaly "A rare birth defect in women where the urethra and vagina both open into a common channel." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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