ENSG00000129194


Homo sapiens

Features
Gene ID: ENSG00000129194
  
Biological name :SOX15
  
Synonyms : O60248 / SOX15 / SRY-box 15
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: p13.1
Gene start: 7588178
Gene end: 7590170
  
Corresponding Affymetrix probe sets: 206122_at (Human Genome U133 Plus 2.0 Array)   217040_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000458286
Ensembl peptide - ENSP00000355354
Ensembl peptide - ENSP00000439311
NCBI entrez gene - 6665     See in Manteia.
OMIM - 601297
RefSeq - NM_006942
RefSeq Peptide - NP_008873
swissprot - O60248
Ensembl - ENSG00000129194
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Sox15ENSMUSG00000041287Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SOX3 / P41225 / SRY-box 3ENSG0000013459545
SOX1 / O00570 / SRY-box 1ENSG0000018296842
SOX2 / P48431 / SRY-box 2ENSG0000018144939
SOX21 / Q9Y651 / SRY-box 21ENSG0000012528536
SOX9 / P48436 / SRY-box 9ENSG0000012539835
SOX14 / O95416 / SRY-box 14ENSG0000016887535
SOX8 / P57073 / SRY-box 8ENSG0000000551333
SOX4 / Q06945 / SRY-box 4ENSG0000012476633
SOX17 / Q9H6I2 / SRY-box 17ENSG0000016473633
SOX10 / P56693 / SRY-box 10ENSG0000010014633
SOX18 / P35713 / SRY-box 18ENSG0000020388332
SOX7 / Q9BT81 / SRY-box 7ENSG0000017105632
SOX11 / P35716 / SRY-box 11ENSG0000017688731
SRY / Q05066 / sex determining region YENSG0000018489529
SOX12 / O15370 / SRY-box 12ENSG0000017773228
AC105001.2ENSG0000025872423


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR031269  Protein SOX-15
 IPR036910  High mobility group box domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISS
 biological_processGO:0006325 chromatin organization NAS
 biological_processGO:0006355 regulation of transcription, DNA-templated NAS
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0008584 male gonad development TAS
 biological_processGO:0014718 positive regulation of satellite cell activation involved in skeletal muscle regeneration ISS
 biological_processGO:0030154 cell differentiation ISS
 biological_processGO:0043403 skeletal muscle tissue regeneration IEA
 biological_processGO:0045843 negative regulation of striated muscle tissue development ISS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0048627 myoblast development ISS
 biological_processGO:0070318 positive regulation of G0 to G1 transition ISS
 biological_processGO:2000288 positive regulation of myoblast proliferation ISS
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0044798 nuclear transcription factor complex IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding NAS
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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