ENSG00000198542


Homo sapiens

Features
Gene ID: ENSG00000198542
  
Biological name :ITGBL1
  
Synonyms : integrin subunit beta like 1 / ITGBL1 / O95965
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q33.1
Gene start: 101452593
Gene end: 101720856
  
Corresponding Affymetrix probe sets: 1557080_s_at (Human Genome U133 Plus 2.0 Array)   205422_s_at (Human Genome U133 Plus 2.0 Array)   214927_at (Human Genome U133 Plus 2.0 Array)   231993_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000439903
Ensembl peptide - ENSP00000365351
Ensembl peptide - ENSP00000475328
Ensembl peptide - ENSP00000481484
Ensembl peptide - ENSP00000481065
Ensembl peptide - ENSP00000365332
NCBI entrez gene - 9358     See in Manteia.
OMIM - 604234
RefSeq - XM_005254100
RefSeq - NM_001271754
RefSeq - NM_001271755
RefSeq - NM_001271756
RefSeq - NM_004791
RefSeq Peptide - NP_001258683
RefSeq Peptide - NP_001258684
RefSeq Peptide - NP_004782
RefSeq Peptide - NP_001258685
swissprot - U3KPX5
swissprot - O95965
swissprot - A0A024RDW7
swissprot - A0A087WY35
swissprot - A0A087WXI7
Ensembl - ENSG00000198542
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 itgbl1ENSDARG00000040985Danio rerio
 ITGBL1ENSGALG00000016867Gallus gallus
 Itgbl1ENSMUSG00000032925Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ITGB6 / P18564 / integrin subunit beta 6ENSG0000011522127
ITGB2 / P05107 / integrin subunit beta 2ENSG0000016025526
ITGB5 / P18084 / integrin subunit beta 5ENSG0000008278125
ITGB3 / P05106 / integrin subunit beta 3ENSG0000025920725
AC068234.1ENSG0000025975325
ITGB7 / P26010 / integrin subunit beta 7ENSG0000013962624
ITGB4 / P16144 / integrin subunit beta 4ENSG0000013247024
ITGB1 / P05556 / integrin subunit beta 1ENSG0000015009323
ITGB8 / P26012 / integrin subunit beta 8ENSG0000010585522


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR013111  EGF-like domain, extracellular
 IPR015812  Integrin beta subunit
 IPR027070  Integrin beta-like protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005886 plasma membrane TAS


Pathways (from Reactome)
Pathway description
RUNX2 regulates genes involved in cell migration


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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