ENSG00000198734


Homo sapiens

Features
Gene ID: ENSG00000198734
  
Biological name :F5
  
Synonyms : coagulation factor V / F5 / P12259
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q24.2
Gene start: 169514166
Gene end: 169586588
  
Corresponding Affymetrix probe sets: 204713_s_at (Human Genome U133 Plus 2.0 Array)   204714_s_at (Human Genome U133 Plus 2.0 Array)   231029_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000356770
Ensembl peptide - ENSP00000356771
NCBI entrez gene - 2153     See in Manteia.
OMIM - 612309
RefSeq - NM_000130
RefSeq - XM_017000660
RefSeq Peptide - NP_000121
swissprot - A0A0A0MRJ7
swissprot - P12259
Ensembl - ENSG00000198734
  
Related genetic diseases (OMIM): 227400 - Factor V deficiency, 227400
  188055 - Thrombophilia due to activated protein C resistance, 188055
  600880 - {Budd-Chiari syndrome}, 600880
  614389 - {Pregnancy loss, recurrent, susceptibility to, 1}, 614389
  601367 - {Stroke, ischemic, susceptibility to}, 601367
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 f5ENSDARG00000055705Danio rerio
 F5ENSGALG00000029298Gallus gallus
 F5ENSMUSG00000026579Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F8 / P00451 / coagulation factor VIIIENSG0000018501030
HEPH / Q9BQS7 / hephaestinENSG0000008947218
HEPHL1 / Q6MZM0 / hephaestin like 1ENSG0000018133317
CP / P00450 / ceruloplasminENSG0000004745717
EDIL3 / O43854 / EGF like repeats and discoidin domains 3ENSG000001641768
NRP1 / O14786 / neuropilin 1ENSG000000992507
MFGE8 / Q08431 / milk fat globule-EGF factor 8 proteinENSG000001405457
NRP2 / O60462 / neuropilin 2ENSG000001182577
DCBLD1 / Q8N8Z6 / discoidin, CUB and LCCL domain containing 1ENSG000001644656
DCBLD2 / Q96PD2 / discoidin, CUB and LCCL domain containing 2ENSG000000570196
RS1 / O15537 / retinoschisin 1ENSG000001021044


Protein motifs (from Interpro)
Interpro ID Name
 IPR000421  Coagulation factor 5/8 C-terminal domain
 IPR008972  Cupredoxin
 IPR008979  Galactose-binding-like domain superfamily
 IPR011707  Multicopper oxidase, type 3
 IPR024715  Coagulation factor 5/8-like
 IPR033138  Multicopper oxidases, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002576 platelet degranulation TAS
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0007596 blood coagulation TAS
 biological_processGO:0007599 hemostasis IEA
 biological_processGO:0008015 blood circulation IEA
 biological_processGO:0043687 post-translational protein modification TAS
 biological_processGO:0044267 cellular protein metabolic process TAS
 biological_processGO:0048208 COPII vesicle coating TAS
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle TAS
 cellular_componentGO:0031091 platelet alpha granule IEA
 cellular_componentGO:0031093 platelet alpha granule lumen TAS
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane TAS
 cellular_componentGO:1903561 extracellular vesicle HDA
 molecular_functionGO:0005507 copper ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Common Pathway of Fibrin Clot Formation
COPII-mediated vesicle transport
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Cargo concentration in the ER
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000132 Menorrhagia 
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 HP:0000421 Epistaxis 
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0000978 Ecchymoses 
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 HP:0001082 Cholecystitis 
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 HP:0001394 Cirrhosis 
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 HP:0001409 Portal hypertension 
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 HP:0001541 Ascites 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001824 Weight loss 
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 HP:0001945 Fever 
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 HP:0002024 Malabsorption 
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 HP:0002027 Abdominal pain 
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 HP:0002040 Esophageal varices 
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 HP:0002239 Gastrointestinal hemorrhage 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002586 Peritonitis 
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 HP:0002625 Deep venous thrombosis 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003010 Prolonged bleeding time 
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 HP:0003225 Factor V deficiency 
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 HP:0003581 Onset in adulthood 
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 HP:0003645 Prolonged partial thromboplastin time 
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 HP:0005214 Intestinal obstruction 
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 HP:0005244 Gastrointestinal infarctions 
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 HP:0005542 Whole-blood clotting time prolonged 
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 HP:0006554 Acute hepatic failure "Hepatic failure refers to the inability of the liver to perform its normal synthetic and metabolic functions, which can result in coagulopathy and alteration in the mental status of a previously healthy individual. Hepatic failure is defined as acute if there is onset of encephalopathy within 8 weeks of the onset of symptoms in a patient with a previously healthy liver." [HPO:curators]
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 HP:0008151 Prolonged prothrombin and partial thromboplastin times 
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 HP:0012175 Resistance to activated protein C "Poor anticoagulant response to activated protein C. A plasma is termed APC resistant when the addition of exogenous APC fails to prolong its clotting time in an activated partial thromboplastin time assay." [HPO:probinson, pmid:14976057]
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 HP:0100602 Preecplampsia "Pregnancy-induced hypertension in association with significant amounts of protein in the urine." [HPO:sdoelken]
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 HP:0100724 Hypercoagulability 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000115718 PROC / P04070 / protein C, inactivator of coagulation factors Va and VIIIa  / reaction
 ENSG00000074695 LMAN1 / P49257 / lectin, mannose binding 1  / reaction / complex
 ENSG00000180210 F2 / P00734 / coagulation factor II, thrombin  / reaction
 ENSG00000180398 MCFD2 / Q8NI22 / multiple coagulation factor deficiency 2  / reaction / complex
 ENSG00000126218 F10 / P00742 / coagulation factor X  / complex / reaction
 ENSG00000198734 F5 / P12259 / coagulation factor V  / complex






 

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