Manteia

ENSG00000204179

Homo sapiens

Features

Gene ID:	ENSG00000204179

Biological name :	PTPN20

Synonyms :	protein tyrosine phosphatase, non-receptor type 20 / PTPN20 / Q4JDL3

Possible biological names infered from orthology :

Species:	Homo sapiens

Chr. number:	10
Strand:	1
Band:	q11.22
Gene start:	46911396
Gene end:	47002488

Corresponding Affymetrix probe sets:	215172_at (Human Genome U133 Plus 2.0 Array)

Cross references:	Ensembl peptide - ENSP00000427676 Ensembl peptide - ENSP00000426355 Ensembl peptide - ENSP00000426681 Ensembl peptide - ENSP00000477675 Ensembl peptide - ENSP00000480504 Ensembl peptide - ENSP00000479990 Ensembl peptide - ENSP00000363335 Ensembl peptide - ENSP00000363459 Ensembl peptide - ENSP00000363462 Ensembl peptide - ENSP00000363466 Ensembl peptide - ENSP00000379071 Ensembl peptide - ENSP00000379072 Ensembl peptide - ENSP00000379075 Ensembl peptide - ENSP00000379077 Ensembl peptide - ENSP00000396009 Ensembl peptide - ENSP00000403444 Ensembl peptide - ENSP00000420995 Ensembl peptide - ENSP00000421404 Ensembl peptide - ENSP00000421453 Ensembl peptide - ENSP00000421921 Ensembl peptide - ENSP00000422384 Ensembl peptide - ENSP00000422839 Ensembl peptide - ENSP00000423819 Ensembl peptide - ENSP00000424283 Ensembl peptide - ENSP00000424491 Ensembl peptide - ENSP00000425012 Ensembl peptide - ENSP00000425362 Ensembl peptide - ENSP00000425912 NCBI entrez gene - 26095 See in Manteia. OMIM - 610630 OMIM - 610631 RefSeq - XM_017016065 RefSeq - NM_001352521 RefSeq - NM_001352532 RefSeq - NM_001352547 RefSeq - NM_001352551 RefSeq - NM_015605 RefSeq - XM_011539605 RefSeq - XM_011539606 RefSeq - XM_011539607 RefSeq - XM_011539610 RefSeq - XM_017016042 RefSeq - XM_017016043 RefSeq - XM_017016044 RefSeq - XM_017016045 RefSeq - XM_017016046 RefSeq - XM_017016047 RefSeq - XM_017016048 RefSeq - XM_017016049 RefSeq - XM_017016050 RefSeq - XM_017016051 RefSeq - XM_017016052 RefSeq - XM_017016053 RefSeq - XM_017016054 RefSeq - XM_017016055 RefSeq - XM_017016056 RefSeq - XM_017016057 RefSeq - XM_017016058 RefSeq - XM_017016059 RefSeq - XM_017016060 RefSeq - XM_017016061 RefSeq - XM_017016062 RefSeq - XM_017016063 RefSeq - XM_017016064 RefSeq - NM_001042357 RefSeq - NM_001042358 RefSeq - NM_001042359 RefSeq - NM_001042360 RefSeq - NM_001042361 RefSeq - NM_001042362 RefSeq - NM_001042363 RefSeq - NM_001042364 RefSeq - NM_001042365 RefSeq - NM_001320681 RefSeq - NM_001320682 RefSeq - NM_001320683 RefSeq - NM_001320684 RefSeq - NM_001320685 RefSeq - NM_001320686 RefSeq - NM_001320688 RefSeq - NM_001320689 RefSeq - NM_001320690 RefSeq - NM_001320691 RefSeq Peptide - NP_001035821 RefSeq Peptide - NP_056420 RefSeq Peptide - NP_001035816 RefSeq Peptide - NP_001035817 RefSeq Peptide - NP_001035818 RefSeq Peptide - NP_001035819 RefSeq Peptide - NP_001035820 RefSeq Peptide - NP_001035822 RefSeq Peptide - NP_001035823 RefSeq Peptide - NP_001035824 RefSeq Peptide - NP_001307610 RefSeq Peptide - NP_001307611 RefSeq Peptide - NP_001307612 RefSeq Peptide - NP_001307613 RefSeq Peptide - NP_001307614 RefSeq Peptide - NP_001307615 RefSeq Peptide - NP_001307617 RefSeq Peptide - NP_001307618 RefSeq Peptide - NP_001307619 RefSeq Peptide - NP_001307620 RefSeq Peptide - NP_001339450 RefSeq Peptide - NP_001339460 RefSeq Peptide - NP_001339461 RefSeq Peptide - NP_001339462 RefSeq Peptide - NP_001339476 RefSeq Peptide - NP_001339480 swissprot - D6RC68 swissprot - Q4JDK3 swissprot - Q4JDL3 swissprot - Q5T1G4 swissprot - A0A0A0MSU6 swissprot - D6RF36 Ensembl - ENSG00000204179

See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
O55082	ENSMUSG00000021940	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
PTPRJ / Q12913 / protein tyrosine phosphatase, receptor type J	ENSG00000149177	29
PTPRB / P23467 / protein tyrosine phosphatase, receptor type B	ENSG00000127329	28
PTPRO / Q16827 / protein tyrosine phosphatase, receptor type O	ENSG00000151490	27
PTPRH / Q9HD43 / protein tyrosine phosphatase, receptor type H	ENSG00000080031	27
PTPRQ / protein tyrosine phosphatase, receptor type Q	ENSG00000139304	26
PTPN9 / P43378 / protein tyrosine phosphatase, non-receptor type 9	ENSG00000169410	25
PTPN18 / Q99952 / protein tyrosine phosphatase, non-receptor type 18	ENSG00000072135	25
PTPN12 / Q05209 / protein tyrosine phosphatase, non-receptor type 12	ENSG00000127947	23
PTPN22 / Q9Y2R2 / protein tyrosine phosphatase, non-receptor type 22	ENSG00000134242	23
PTPN1 / P18031 / protein tyrosine phosphatase, non-receptor type 1	ENSG00000196396	22
PTPN2 / P17706 / protein tyrosine phosphatase, non-receptor type 2	ENSG00000175354	21

Protein motifs (from Interpro)

Interpro ID	Name
IPR000242	PTP type protein phosphatase
IPR000387	Tyrosine specific protein phosphatases domain
IPR003595	Protein-tyrosine phosphatase, catalytic
IPR016130	Protein-tyrosine phosphatase, active site
IPR029021	Protein-tyrosine phosphatase-like

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006470	protein dephosphorylation	IEA
biological_process	GO:0016311	dephosphorylation	IEA
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation	IEA
biological_process	GO:0071345	cellular response to cytokine stimulus	TAS
cellular_component	GO:0005634	nucleus	IEA
cellular_component	GO:0005654	nucleoplasm	TAS
cellular_component	GO:0005737	cytoplasm	IEA
cellular_component	GO:0005815	microtubule organizing center	IEA
cellular_component	GO:0005856	cytoskeleton	IEA
cellular_component	GO:0005874	microtubule	IEA
molecular_function	GO:0004721	phosphoprotein phosphatase activity	IEA
molecular_function	GO:0004725	protein tyrosine phosphatase activity	IEA
molecular_function	GO:0016787	hydrolase activity	IEA
molecular_function	GO:0016791	phosphatase activity	IEA

Pathways (from Reactome)

Pathway description

Interleukin-37 signaling

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr