ENSG00000151490


Homo sapiens

Features
Gene ID: ENSG00000151490
  
Biological name :PTPRO
  
Synonyms : protein tyrosine phosphatase, receptor type O / PTPRO / Q16827
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p12.3
Gene start: 15322397
Gene end: 15597399
  
Corresponding Affymetrix probe sets: 1554199_at (Human Genome U133 Plus 2.0 Array)   208121_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000444173
Ensembl peptide - ENSP00000439234
Ensembl peptide - ENSP00000445621
Ensembl peptide - ENSP00000446201
Ensembl peptide - ENSP00000281171
Ensembl peptide - ENSP00000343434
Ensembl peptide - ENSP00000393449
Ensembl peptide - ENSP00000404188
Ensembl peptide - ENSP00000437571
NCBI entrez gene - 5800     See in Manteia.
OMIM - 600579
RefSeq - XM_017019725
RefSeq - NM_002848
RefSeq - NM_030667
RefSeq - NM_030668
RefSeq - NM_030669
RefSeq - NM_030670
RefSeq - NM_030671
RefSeq Peptide - NP_109596
RefSeq Peptide - NP_002839
RefSeq Peptide - NP_109592
RefSeq Peptide - NP_109593
RefSeq Peptide - NP_109594
RefSeq Peptide - NP_109595
swissprot - Q16827
swissprot - A0A024RAS0
swissprot - H0YH11
swissprot - H0YH60
swissprot - A0A024RAS9
Ensembl - ENSG00000151490
  
Related genetic diseases (OMIM): 614196 - Nephrotic syndrome, type 6, 614196
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptproENSDARG00000110470Danio rerio
 PTPROENSGALG00000013085Gallus gallus
 PtproENSMUSG00000030223Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTPRB / P23467 / protein tyrosine phosphatase, receptor type BENSG0000012732928
PTPRQ / protein tyrosine phosphatase, receptor type QENSG0000013930421
PTPRJ / Q12913 / protein tyrosine phosphatase, receptor type JENSG0000014917720
PTPRH / Q9HD43 / protein tyrosine phosphatase, receptor type HENSG0000008003119
PTPN9 / P43378 / protein tyrosine phosphatase, non-receptor type 9ENSG0000016941010
PTPN20 / Q4JDL3 / protein tyrosine phosphatase, non-receptor type 20ENSG000002041799
PTPN12 / Q05209 / protein tyrosine phosphatase, non-receptor type 12ENSG000001279478
PTPN1 / P18031 / protein tyrosine phosphatase, non-receptor type 1ENSG000001963968
PTPN22 / Q9Y2R2 / protein tyrosine phosphatase, non-receptor type 22ENSG000001342428
PTPN18 / Q99952 / protein tyrosine phosphatase, non-receptor type 18ENSG000000721358
PTPN2 / P17706 / protein tyrosine phosphatase, non-receptor type 2ENSG000001753548


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR029021  Protein-tyrosine phosphatase-like
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis ISS
 biological_processGO:0002548 monocyte chemotaxis IMP
 biological_processGO:0003093 regulation of glomerular filtration ISS
 biological_processGO:0003105 negative regulation of glomerular filtration ISS
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0007411 axon guidance ISS
 biological_processGO:0010812 negative regulation of cell-substrate adhesion ISS
 biological_processGO:0010977 negative regulation of neuron projection development ISS
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0030032 lamellipodium assembly ISS
 biological_processGO:0032835 glomerulus development IMP
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0036060 slit diaphragm assembly NAS
 biological_processGO:0072112 glomerular visceral epithelial cell differentiation ISS
 biological_processGO:0090090 negative regulation of canonical Wnt signaling pathway ISS
 biological_processGO:0090260 negative regulation of retinal ganglion cell axon guidance ISS
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0005887 integral component of plasma membrane NAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0016324 apical plasma membrane ISS
 cellular_componentGO:0016328 lateral plasma membrane ISS
 cellular_componentGO:0030027 lamellipodium ISS
 cellular_componentGO:0030424 axon ISS
 cellular_componentGO:0030426 growth cone ISS
 cellular_componentGO:0043005 neuron projection ISS
 cellular_componentGO:0043197 dendritic spine ISS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0005001 transmembrane receptor protein tyrosine phosphatase activity NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity ISS
 molecular_functionGO:0017147 Wnt-protein binding ISS
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity ISS


Pathways (from Reactome)
Pathway description
Signaling by NTRK3 (TRKC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000093 Proteinuria 
Show

 HP:0000097 Focal segmental glomerulosclerosis 
Show

 HP:0000100 Nephrotic syndrome 
Show

 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
Show

 HP:0003073 Hypoalbuminemia "Reduction in the concentration of albumin in the blood." [HPO:curators]
Show

 HP:0003828 Variable expressivity 
Show

 HP:0005576 Tubulointerstitial fibrosis 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr