ENSGALG00000002192


Gallus gallus

Features
Gene ID: ENSGALG00000002192
  
Biological name :PTPRC
  
Synonyms : protein tyrosine phosphatase, receptor type C / PTPRC
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 2036933
Gene end: 2110380
  
Corresponding Affymetrix probe sets: Gga.10545.1.S1_at (Chicken Array)   Gga.1193.1.S1_at (Chicken Array)   Gga.1193.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047447
Ensembl peptide - ENSGALP00000064827
Ensembl peptide - ENSGALP00000055645
Ensembl peptide - ENSGALP00000055398
Ensembl peptide - ENSGALP00000003423
NCBI entrez gene - 386580     See in Manteia.
RefSeq - XM_015290239
RefSeq - XM_015290233
RefSeq - XM_015290234
RefSeq - XM_015290235
RefSeq - XM_015290236
RefSeq - XM_015290237
RefSeq - XM_015290238
RefSeq - NM_204417
RefSeq Peptide - NP_989748
swissprot - A0A1L1S114
swissprot - A0A1D5PRW6
swissprot - A0A1D5PR76
swissprot - F1NVB1
swissprot - A0A1D5P441
Ensembl - ENSGALG00000002192
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptprcENSDARG00000071437Danio rerio
 PTPRCENSG00000081237Homo sapiens
 PtprcENSMUSG00000026395Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTPRD / protein tyrosine phosphatase, receptor type D / P23468* / Q64487*ENSGALG0000001505826
PTPRS / F1NWE3 / Receptor-type tyrosine-protein phosphatase S / B0V2N1* / Q13332* / protein tyrosine phosphatase, receptor type S*ENSGALG0000000404825
PTPRF / protein tyrosine phosphatase, receptor type F / A2A8L5* / P10586* / Receptor-type tyrosine-protein phosphatase F *ENSGALG0000001005325
PTPRK / protein tyrosine phosphatase, receptor type K / P35822* / Q15262*ENSGALG0000003742322
PTPRE / protein tyrosine phosphatase, receptor type E / P23469* / P49446* / Receptor-type tyrosine-protein phosphatase epsilon *ENSGALG0000000982322
PTPRA / protein tyrosine phosphatase, receptor type A / P18052* / P18433*ENSGALG0000001599522
PTPRT / protein tyrosine phosphatase, receptor type T / O14522* / Q99M80* / Receptor-type tyrosine-protein phosphatase T *ENSGALG0000003788922
PTPRZ1 / protein tyrosine phosphatase, receptor type Z1 / B9EKR1* / P23471* / protein tyrosine phosphatase, receptor type Z, polypeptide 1*ENSGALG0000004011421
PTPRU / receptor-type tyrosine-protein phosphatase U precursor / B1AUH1* / Q92729* / protein tyrosine phosphatase, receptor type U*ENSGALG0000003144021
PTPRM / protein tyrosine phosphatase, receptor type M / P28827* / P28828*ENSGALG0000003128421
PTPRG / receptor-type tyrosine-protein phosphatase gamma precursor / P23470* / protein tyrosine phosphatase, receptor type G* / receptor-type tyrosine-protein phosphatase gamma isoform 2 *ENSGALG0000000717720


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR016335  Receptor-type tyrosine-protein phosphatase C
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0050852 T cell receptor signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr