ENSGALG00000031284


Gallus gallus

Features
Gene ID: ENSGALG00000031284
  
Biological name :PTPRM
  
Synonyms : protein tyrosine phosphatase, receptor type M / PTPRM
  
Possible biological names infered from orthology : P28827 / P28828
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 99160698
Gene end: 99619495
  
Corresponding Affymetrix probe sets: Gga.11060.1.S1_at (Chicken Array)   GgaAffx.8830.1.S1_at (Chicken Array)   GgaAffx.8832.1.S1_at (Chicken Array)   GgaAffx.8842.1.S1_at (Chicken Array)   GgaAffx.8842.1.S1_s_at (Chicken Array)   GgaAffx.8842.2.S1_at (Chicken Array)   GgaAffx.8846.1.S1_at (Chicken Array)   GgaAffx.8848.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052404
Ensembl peptide - ENSGALP00000057525
Ensembl peptide - ENSGALP00000053375
NCBI entrez gene - 421049     See in Manteia.
RefSeq - XM_015282551
RefSeq - XM_015282548
RefSeq - XM_015282549
RefSeq - XM_015282550
RefSeq - XM_015282544
RefSeq - XM_015282545
RefSeq - XM_015282546
RefSeq - XM_015282547
swissprot - A0A1D5PX34
swissprot - A0A1D5PKL5
swissprot - A0A1D5PHX3
Ensembl - ENSGALG00000031284
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01084131.1ENSDARG00000114762Danio rerio
 si:ch1073-391i24.1ENSDARG00000089172Danio rerio
 PTPRMENSG00000173482Homo sapiens
 PtprmENSMUSG00000033278Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTPRT / protein tyrosine phosphatase, receptor type T / O14522* / Q99M80* / Receptor-type tyrosine-protein phosphatase T *ENSGALG0000003788967
PTPRK / protein tyrosine phosphatase, receptor type K / P35822* / Q15262*ENSGALG0000003742360
PTPRU / receptor-type tyrosine-protein phosphatase U precursor / B1AUH1* / Q92729* / protein tyrosine phosphatase, receptor type U*ENSGALG0000003144054
PTPRD / protein tyrosine phosphatase, receptor type D / P23468* / Q64487*ENSGALG0000001505829
PTPRF / protein tyrosine phosphatase, receptor type F / A2A8L5* / P10586* / Receptor-type tyrosine-protein phosphatase F *ENSGALG0000001005328
PTPRS / F1NWE3 / Receptor-type tyrosine-protein phosphatase S / B0V2N1* / Q13332* / protein tyrosine phosphatase, receptor type S*ENSGALG0000000404827
PTPRZ1 / protein tyrosine phosphatase, receptor type Z1 / B9EKR1* / P23471* / protein tyrosine phosphatase, receptor type Z, polypeptide 1*ENSGALG0000004011421
PTPRG / receptor-type tyrosine-protein phosphatase gamma precursor / P23470* / protein tyrosine phosphatase, receptor type G* / receptor-type tyrosine-protein phosphatase gamma isoform 2 *ENSGALG0000000717719
PTPRC / protein tyrosine phosphatase, receptor type CENSGALG0000000219218
PTPRE / protein tyrosine phosphatase, receptor type E / P23469* / P49446* / Receptor-type tyrosine-protein phosphatase epsilon *ENSGALG0000000982317
PTPRA / protein tyrosine phosphatase, receptor type A / P18052* / P18433*ENSGALG0000001599517


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR000998  MAM domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013151  Immunoglobulin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001937 negative regulation of endothelial cell proliferation IEA
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0010596 negative regulation of endothelial cell migration IEA
 biological_processGO:0010842 retina layer formation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0016525 negative regulation of angiogenesis IEA
 biological_processGO:0031175 neuron projection development IEA
 biological_processGO:0031290 retinal ganglion cell axon guidance IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0097755 positive regulation of blood vessel diameter IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0005001 transmembrane receptor protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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