ENSGALG00000037889


Gallus gallus

Features
Gene ID: ENSGALG00000037889
  
Biological name :PTPRT
  
Synonyms : protein tyrosine phosphatase, receptor type T / PTPRT
  
Possible biological names infered from orthology : O14522 / Q99M80 / Receptor-type tyrosine-protein phosphatase T
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 2969761
Gene end: 3395447
  
Corresponding Affymetrix probe sets: Gga.11089.1.S1_at (Chicken Array)   GgaAffx.2151.1.S1_at (Chicken Array)   GgaAffx.2154.1.S1_at (Chicken Array)   GgaAffx.2164.1.S1_at (Chicken Array)   GgaAffx.2174.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051418
NCBI entrez gene - 419160     See in Manteia.
RefSeq - XM_004946990
RefSeq - XM_004946992
RefSeq - XM_004946993
RefSeq - XM_004946995
RefSeq - XM_015296783
RefSeq - XM_015296784
RefSeq - XM_015296785
RefSeq - XM_015296786
RefSeq - XM_015296787
RefSeq - XM_015296788
RefSeq - XM_417344
RefSeq - XM_004946986
swissprot - A0A1D5PF56
Ensembl - ENSGALG00000037889
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptprtENSDARG00000074781Danio rerio
 ptprtENSDARG00000097572Danio rerio
 PTPRTENSG00000196090Homo sapiens
 PtprtENSMUSG00000053141Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTPRM / protein tyrosine phosphatase, receptor type M / P28827* / P28828*ENSGALG0000003128466
PTPRK / protein tyrosine phosphatase, receptor type K / P35822* / Q15262*ENSGALG0000003742356
PTPRU / receptor-type tyrosine-protein phosphatase U precursor / B1AUH1* / Q92729* / protein tyrosine phosphatase, receptor type U*ENSGALG0000003144050
PTPRD / protein tyrosine phosphatase, receptor type D / P23468* / Q64487*ENSGALG0000001505827
PTPRS / F1NWE3 / Receptor-type tyrosine-protein phosphatase S / B0V2N1* / Q13332* / protein tyrosine phosphatase, receptor type S*ENSGALG0000000404826
PTPRF / protein tyrosine phosphatase, receptor type F / A2A8L5* / P10586* / Receptor-type tyrosine-protein phosphatase F *ENSGALG0000001005326
PTPRZ1 / protein tyrosine phosphatase, receptor type Z1 / B9EKR1* / P23471* / protein tyrosine phosphatase, receptor type Z, polypeptide 1*ENSGALG0000004011420
PTPRG / receptor-type tyrosine-protein phosphatase gamma precursor / P23470* / protein tyrosine phosphatase, receptor type G* / receptor-type tyrosine-protein phosphatase gamma isoform 2 *ENSGALG0000000717719
PTPRC / protein tyrosine phosphatase, receptor type CENSGALG0000000219218
PTPRA / protein tyrosine phosphatase, receptor type A / P18052* / P18433*ENSGALG0000001599517
PTPRE / protein tyrosine phosphatase, receptor type E / P23469* / P49446* / Receptor-type tyrosine-protein phosphatase epsilon *ENSGALG0000000982316


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR000998  MAM domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0008013 beta-catenin binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016790 thiolester hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA
 molecular_functionGO:0045294 alpha-catenin binding IEA
 molecular_functionGO:0045295 gamma-catenin binding IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0051393 alpha-actinin binding IEA
 molecular_functionGO:0070097 delta-catenin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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