ENSGALG00000003965


Gallus gallus

Features
Gene ID: ENSGALG00000003965
  
Biological name :DBX1
  
Synonyms : DBX1 / developing brain homeobox 1
  
Possible biological names infered from orthology : A6NMT0 / Homeobox protein DBX1 / P52950
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 2002977
Gene end: 2006676
  
Corresponding Affymetrix probe sets: GgaAffx.2468.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006307
NCBI entrez gene - 422976     See in Manteia.
RefSeq - NM_001199474
RefSeq Peptide - NP_001186403
swissprot - E1BS07
Ensembl - ENSGALG00000003965
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dbx1aENSDARG00000086393Danio rerio
 dbx1bENSDARG00000001859Danio rerio
 DBX1ENSG00000109851Homo sapiens
 Dbx1ENSMUSG00000030507Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DBX2 / developing brain homeobox 2 / Q6ZNG2*ENSGALG0000000960431
HLX / H2.0 like homeobox / Q14774* / Q61670* / H2.0-like homeobox protein *ENSGALG0000003725725
NKX6-1 / NK6 homeobox 1 / P78426* / Q99MA9* / Homeobox protein Nkx-6.1 *ENSGALG0000003254518
HHEX / hematopoietically-expressed homeobox protein HHEX / P43120* / Q03014* / hematopoietically expressed homeobox*ENSGALG0000003000818
NKX6-2 / NK6 homeobox 2 / Q9C056*ENSGALG0000001050016
ENSGALG0000000219116
BARX1 / Q9DED6 / Homeobox protein BarH-like 1b / Q9ER42* / Q9HBU1* / BARX homeobox 1* / Homeobox protein BarH-like 1 *ENSGALG0000003555716
BARX2 / BARX homeobox 2 / O08686* / Q9UMQ3* / Homeobox protein BarH-like 2 *ENSGALG0000002938216
LBX1* / P52954* / P52955* / ladybird homeobox 1* / Transcription factor LBX1 *ENSGALG0000003418915
BSX / Q6RFL5 / Brain-specific homeobox protein homolog / Q3C1V8* / Q810B3* / brain specific homeobox*ENSGALG0000000651515
TLX1 / T-cell leukemia homeobox protein 1 / P31314* / T cell leukemia homeobox 1*ENSGALG0000000783114
BARHL1 / BarH like homeobox 1 / P63157* / Q9BZE3* / BarH-like 1 homeobox protein *ENSGALG0000004321714
NKX6-3 / NK6 homeobox 3 / A6NJ46* / Q3UHX8* / Homeobox protein Nkx-6.3 *ENSGALG0000001850314
BARHL2 / BarH like homeobox 2 / Q8VIB5* / Q9NY43* / BarH-like 2 homeobox protein *ENSGALG0000004006914


Protein motifs (from Interpro)
Interpro ID Name
 IPR000047  Helix-turn-helix motif
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IDA
 biological_processGO:0021521 ventral spinal cord interneuron specification IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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