ENSGALG00000007831


Gallus gallus

Features
Gene ID: ENSGALG00000007831
  
Biological name :TLX1
  
Synonyms : T-cell leukemia homeobox protein 1 / TLX1
  
Possible biological names infered from orthology : P31314 / T cell leukemia homeobox 1
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 23040454
Gene end: 23045778
  
Corresponding Affymetrix probe sets: Gga.511.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012693
NCBI entrez gene - 395868     See in Manteia.
RefSeq - NM_205015
RefSeq - XM_015288580
RefSeq Peptide - NP_990346
swissprot - F1NNC8
Ensembl - ENSGALG00000007831
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tlx1ENSDARG00000003965Danio rerio
 tlx2ENSDARG00000011273Danio rerio
 TLX1ENSG00000107807Homo sapiens
 Tlx1ENSMUSG00000025215Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000000219157
BARHL2 / BarH like homeobox 2 / Q8VIB5* / Q9NY43* / BarH-like 2 homeobox protein *ENSGALG0000004006922
LBX1* / P52954* / P52955* / ladybird homeobox 1* / Transcription factor LBX1 *ENSGALG0000003418921
BARHL1 / BarH like homeobox 1 / P63157* / Q9BZE3* / BarH-like 1 homeobox protein *ENSGALG0000004321720
NKX6-1 / NK6 homeobox 1 / P78426* / Q99MA9* / Homeobox protein Nkx-6.1 *ENSGALG0000003254519
HHEX / hematopoietically-expressed homeobox protein HHEX / P43120* / Q03014* / hematopoietically expressed homeobox*ENSGALG0000003000818
BARX2 / BARX homeobox 2 / O08686* / Q9UMQ3* / Homeobox protein BarH-like 2 *ENSGALG0000002938218
NKX6-2 / NK6 homeobox 2 / Q9C056*ENSGALG0000001050018
HLX / H2.0 like homeobox / Q14774* / Q61670* / H2.0-like homeobox protein *ENSGALG0000003725716
NKX6-3 / NK6 homeobox 3 / A6NJ46* / Q3UHX8* / Homeobox protein Nkx-6.3 *ENSGALG0000001850316
BARX1 / Q9DED6 / Homeobox protein BarH-like 1b / Q9ER42* / Q9HBU1* / BARX homeobox 1* / Homeobox protein BarH-like 1 *ENSGALG0000003555716
DBX1 / developing brain homeobox 1 / A6NMT0* / P52950* / Homeobox protein DBX1 *ENSGALG0000000396515
BSX / Q6RFL5 / Brain-specific homeobox protein homolog / Q3C1V8* / Q810B3* / brain specific homeobox*ENSGALG0000000651514
DBX2 / developing brain homeobox 2 / Q6ZNG2*ENSGALG0000000960413


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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