ENSGALG00000005882


Gallus gallus

Features
Gene ID: ENSGALG00000005882
  
Biological name :LRCH2
  
Synonyms : leucine rich repeats and calponin homology domain containing 2 / LRCH2
  
Possible biological names infered from orthology : Leucine-rich repeat and calponin homology domain-containing protein 2 / Q3UMG5 / Q5VUJ6
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 2878851
Gene end: 2913275
  
Corresponding Affymetrix probe sets: Gga.13393.1.S1_s_at (Chicken Array)   Gga.14133.1.S1_at (Chicken Array)   GgaAffx.26643.1.S1_at (Chicken Array)   GgaAffx.26643.2.S1_s_at (Chicken Array)   GgaAffx.26643.4.S1_at (Chicken Array)   GgaAffx.26643.4.S1_s_at (Chicken Array)   GgaAffx.26643.6.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009440
Ensembl peptide - ENSGALP00000057792
Ensembl peptide - ENSGALP00000053158
NCBI entrez gene - 422220     See in Manteia.
RefSeq - XM_420210
RefSeq - XM_004940654
RefSeq - XM_004940655
RefSeq - XM_015278432
RefSeq - XM_003641100
RefSeq - XM_004940653
swissprot - A0A1D5PXU5
swissprot - A0A1D5PK09
swissprot - E1C0J9
Ensembl - ENSGALG00000005882
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrch2ENSDARG00000075580Danio rerio
 LRCH2ENSG00000130224Homo sapiens
 Lrch2ENSMUSG00000031290Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRCH1 / leucine rich repeats and calponin homology domain containing 1 / P62046* / Q9Y2L9* / Leucine-rich repeat and calponin homology domain-containing protein 1 *ENSGALG0000001699044
LRCH3 / leucine rich repeats and calponin homology domain containing 3 / Q8BVU0* / Q96II8* / Leucine-rich repeat and calponin homology domain-containing protein 3 *ENSGALG0000000759527
PIDD1 / p53-induced death domain protein 1 / Q9ERV7* / Q9HB75* / p53-induced death domain-containing protein 1 *ENSGALG0000004072916
LRRC28 / leucine rich repeat containing 28 / Q3TX51* / Q86X40* / Leucine-rich repeat-containing protein 28 *ENSGALG0000000705712
LRRC2 / leucine rich repeat containing 2 / Q9BYS8*ENSGALG0000001363411
LRRC8A / leucine rich repeat containing 8 VRAC subunit A / Q8IWT6* / Q80WG5* / Gm28035* / predicted gene, 28035* / Volume-regulated anion channel subunit LRRC8A *ENSGALG000000045739
LRSAM1 / leucine rich repeat and sterile alpha motif containing 1 / Q6UWE0* / Q80ZI6* / E3 ubiquitin-protein ligase LRSAM1 *ENSGALG000000088199
LRRC18 / leucine rich repeat containing 18 / Q8N456* / Q9CQ07* / Leucine-rich repeat-containing protein 18 *ENSGALG000000061689
LRRC8C / leucine rich repeat containing 8 VRAC subunit C / Q8R502* / Q8TDW0* / Volume-regulated anion channel subunit LRRC8C *ENSGALG000000061708
LRRC8D / leucine rich repeat containing 8 VRAC subunit D / Q7L1W4* / Q8BGR2* / Volume-regulated anion channel subunit LRRC8D *ENSGALG000000208058
LRRC8B / leucine rich repeat containing 8 VRAC subunit B / Q5DU41* / Q6P9F7* / Volume-regulated anion channel subunit LRRC8B *ENSGALG000000061678
LRRC39 / leucine rich repeat containing 39 / Q8BGI7* / Q96DD0* / Leucine-rich repeat-containing protein 39 *ENSGALG000000052847
LRRC57 / leucine rich repeat containing 57 / Q8N9N7* / leucine-rich repeat-containing protein 57 isoform a *ENSGALG000000091127
RSU1 / Ras suppressor protein 1 / Q15404*ENSGALG000000408915


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001715  Calponin homology domain
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005886 plasma membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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