ENSGALG00000016990


Gallus gallus

Features
Gene ID: ENSGALG00000016990
  
Biological name :LRCH1
  
Synonyms : leucine rich repeats and calponin homology domain containing 1 / LRCH1
  
Possible biological names infered from orthology : Leucine-rich repeat and calponin homology domain-containing protein 1 / P62046 / Q9Y2L9
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 168186412
Gene end: 168307865
  
Corresponding Affymetrix probe sets: GgaAffx.10879.1.S1_at (Chicken Array)   GgaAffx.10879.1.S1_s_at (Chicken Array)   GgaAffx.25146.1.S1_at (Chicken Array)   GgaAffx.25146.2.S1_at (Chicken Array)   GgaAffx.25146.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055993
Ensembl peptide - ENSGALP00000027397
NCBI entrez gene - 418855     See in Manteia.
RefSeq - XM_015276492
RefSeq - XM_004938696
swissprot - F1NWR5
swissprot - A0A1D5PSV4
Ensembl - ENSGALG00000016990
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrch1ENSDARG00000078778Danio rerio
 LRCH1ENSG00000136141Homo sapiens
 Lrch1ENSMUSG00000068015Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRCH2 / leucine rich repeats and calponin homology domain containing 2 / Q3UMG5* / Q5VUJ6* / Leucine-rich repeat and calponin homology domain-containing protein 2 *ENSGALG0000000588248
LRCH3 / leucine rich repeats and calponin homology domain containing 3 / Q8BVU0* / Q96II8* / Leucine-rich repeat and calponin homology domain-containing protein 3 *ENSGALG0000000759530
PIDD1 / p53-induced death domain protein 1 / Q9ERV7* / Q9HB75* / p53-induced death domain-containing protein 1 *ENSGALG0000004072918
LRRC28 / leucine rich repeat containing 28 / Q3TX51* / Q86X40* / Leucine-rich repeat-containing protein 28 *ENSGALG0000000705713
LRRC2 / leucine rich repeat containing 2 / Q9BYS8*ENSGALG0000001363411
LRRC8A / leucine rich repeat containing 8 VRAC subunit A / Q8IWT6* / Q80WG5* / Gm28035* / predicted gene, 28035* / Volume-regulated anion channel subunit LRRC8A *ENSGALG0000000457311
LRRC8C / leucine rich repeat containing 8 VRAC subunit C / Q8R502* / Q8TDW0* / Volume-regulated anion channel subunit LRRC8C *ENSGALG0000000617010
LRRC8D / leucine rich repeat containing 8 VRAC subunit D / Q7L1W4* / Q8BGR2* / Volume-regulated anion channel subunit LRRC8D *ENSGALG0000002080510
LRSAM1 / leucine rich repeat and sterile alpha motif containing 1 / Q6UWE0* / Q80ZI6* / E3 ubiquitin-protein ligase LRSAM1 *ENSGALG0000000881910
LRRC18 / leucine rich repeat containing 18 / Q8N456* / Q9CQ07* / Leucine-rich repeat-containing protein 18 *ENSGALG0000000616810
LRRC8B / leucine rich repeat containing 8 VRAC subunit B / Q5DU41* / Q6P9F7* / Volume-regulated anion channel subunit LRRC8B *ENSGALG000000061679
LRRC39 / leucine rich repeat containing 39 / Q8BGI7* / Q96DD0* / Leucine-rich repeat-containing protein 39 *ENSGALG000000052849
LRRC57 / leucine rich repeat containing 57 / Q8N9N7* / leucine-rich repeat-containing protein 57 isoform a *ENSGALG000000091128
RSU1 / Ras suppressor protein 1 / Q15404*ENSGALG000000408916


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001715  Calponin homology domain
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0034260 negative regulation of GTPase activity IEA
 biological_processGO:1990869 cellular response to chemokine IEA
 biological_processGO:2000405 negative regulation of T cell migration IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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