ENSGALG00000005284


Gallus gallus

Features
Gene ID: ENSGALG00000005284
  
Biological name :LRRC39
  
Synonyms : leucine rich repeat containing 39 / LRRC39
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 39 / Q8BGI7 / Q96DD0
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 11908598
Gene end: 11916090
  
Corresponding Affymetrix probe sets: Gga.10839.1.S1_at (Chicken Array)   GgaAffx.26466.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008460
NCBI entrez gene - 424469     See in Manteia.
RefSeq - XM_004936554
RefSeq - XM_015290799
RefSeq - XM_422312
swissprot - E1C1W4
Ensembl - ENSGALG00000005284
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F1R6I3ENSDARG00000071465Danio rerio
 LRRC39ENSG00000122477Homo sapiens
 Lrrc39ENSMUSG00000027961Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRC2 / leucine rich repeat containing 2 / Q9BYS8*ENSGALG0000001363435
LRRC8A / leucine rich repeat containing 8 VRAC subunit A / Q8IWT6* / Q80WG5* / Gm28035* / predicted gene, 28035* / Volume-regulated anion channel subunit LRRC8A *ENSGALG0000000457322
LRRC8B / leucine rich repeat containing 8 VRAC subunit B / Q5DU41* / Q6P9F7* / Volume-regulated anion channel subunit LRRC8B *ENSGALG0000000616720
LRRC8D / leucine rich repeat containing 8 VRAC subunit D / Q7L1W4* / Q8BGR2* / Volume-regulated anion channel subunit LRRC8D *ENSGALG0000002080520
LRRC28 / leucine rich repeat containing 28 / Q3TX51* / Q86X40* / Leucine-rich repeat-containing protein 28 *ENSGALG0000000705720
LRRC8C / leucine rich repeat containing 8 VRAC subunit C / Q8R502* / Q8TDW0* / Volume-regulated anion channel subunit LRRC8C *ENSGALG0000000617020
PIDD1 / p53-induced death domain protein 1 / Q9ERV7* / Q9HB75* / p53-induced death domain-containing protein 1 *ENSGALG0000004072919
LRCH1 / leucine rich repeats and calponin homology domain containing 1 / P62046* / Q9Y2L9* / Leucine-rich repeat and calponin homology domain-containing protein 1 *ENSGALG0000001699018
LRRC18 / leucine rich repeat containing 18 / Q8N456* / Q9CQ07* / Leucine-rich repeat-containing protein 18 *ENSGALG0000000616817
LRCH3 / leucine rich repeats and calponin homology domain containing 3 / Q8BVU0* / Q96II8* / Leucine-rich repeat and calponin homology domain-containing protein 3 *ENSGALG0000000759516
LRCH2 / leucine rich repeats and calponin homology domain containing 2 / Q3UMG5* / Q5VUJ6* / Leucine-rich repeat and calponin homology domain-containing protein 2 *ENSGALG0000000588216
LRSAM1 / leucine rich repeat and sterile alpha motif containing 1 / Q6UWE0* / Q80ZI6* / E3 ubiquitin-protein ligase LRSAM1 *ENSGALG0000000881914
LRRC57 / leucine rich repeat containing 57 / Q8N9N7* / leucine-rich repeat-containing protein 57 isoform a *ENSGALG0000000911214
RSU1 / Ras suppressor protein 1 / Q15404*ENSGALG0000004089113


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr