ENSMUSG00000031290


Mus musculus

Features
Gene ID: ENSMUSG00000031290
  
Biological name :Lrch2
  
Synonyms : Leucine-rich repeat and calponin homology domain-containing protein 2 / Lrch2 / Q3UMG5
  
Possible biological names infered from orthology : leucine rich repeats and calponin homology domain containing 2 / Q5VUJ6
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: F2
Gene start: 147470375
Gene end: 147554081
  
Corresponding Affymetrix probe sets: 10607225 (MoGene1.0st)   1436877_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000108438
Ensembl peptide - ENSMUSP00000117458
Ensembl peptide - ENSMUSP00000121128
Ensembl peptide - ENSMUSP00000123633
NCBI entrez gene - 210297     See in Manteia.
MGI - MGI:2147870
RefSeq - XM_017318456
RefSeq - XM_006528789
RefSeq - XM_006528790
RefSeq - XM_006528791
RefSeq - XM_006528792
RefSeq - XM_017318455
RefSeq - NM_001081173
RefSeq - XM_006528788
RefSeq Peptide - NP_001074642
swissprot - F7AAC3
swissprot - F6VQ19
swissprot - A2AMP0
swissprot - Q3UMG5
Ensembl - ENSMUSG00000031290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrch2ENSDARG00000075580Danio rerio
 LRCH2ENSGALG00000005882Gallus gallus
 LRCH2ENSG00000130224Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrch1 / P62046 / Leucine-rich repeat and calponin homology domain-containing protein 1 / Q9Y2L9* / leucine rich repeats and calponin homology domain containing 1*ENSMUSG0000006801544
Lrch3 / Q8BVU0 / Leucine-rich repeat and calponin homology domain-containing protein 3 / Q96II8* / leucine rich repeats and calponin homology domain containing 3*ENSMUSG0000002280140
Lrch4 / Q921G6 / Leucine-rich repeat and calponin homology domain-containing protein 4 / O75427* / leucine rich repeats and calponin homology domain containing 4*ENSMUSG0000009344532
Q921G6 / Gm20605 / predicted gene 20605 / LRCH4* / O75427* / leucine rich repeats and calponin homology domain containing 4*ENSMUSG0000002972032
Pidd1 / Q9ERV7 / p53-induced death domain-containing protein 1 / Q9HB75* / p53-induced death domain protein 1*ENSMUSG0000002550718
Lrrc28 / Q3TX51 / Leucine-rich repeat-containing protein 28 / Q86X40* / leucine rich repeat containing 28*ENSMUSG0000003055612
Lrrc69 / Q9D9Q0 / Leucine-rich repeat-containing protein 69 / Q6ZNQ3* / leucine rich repeat containing 69*ENSMUSG0000002315110
Lrrc39 / Q8BGI7 / Leucine-rich repeat-containing protein 39 / Q96DD0* / leucine rich repeat containing 39*ENSMUSG000000279619
Lrrc2 / leucine rich repeat containing 2 / Q9BYS8*ENSMUSG000000324959
Q80WG5 / Gm28035 / predicted gene, 28035 / LRRC8A* / Q8IWT6* / leucine rich repeat containing 8 VRAC subunit A*ENSMUSG000000990419
Lrrc8a / Q80WG5 / Volume-regulated anion channel subunit LRRC8A / Q8IWT6* / leucine rich repeat containing 8 VRAC subunit A*ENSMUSG000000074769
Lrrc8e / Q66JT1 / Volume-regulated anion channel subunit LRRC8E / Q6NSJ5* / leucine rich repeat containing 8 VRAC subunit E*ENSMUSG000000465899
Lrsam1 / Q80ZI6 / E3 ubiquitin-protein ligase LRSAM1 / Q6UWE0* / leucine rich repeat and sterile alpha motif containing 1*ENSMUSG000000267929
Lrrc8c / Q8R502 / Volume-regulated anion channel subunit LRRC8C / Q8TDW0* / leucine rich repeat containing 8 VRAC subunit C*ENSMUSG000000547208
Lrrc8d / Q8BGR2 / Volume-regulated anion channel subunit LRRC8D / Q7L1W4* / leucine rich repeat containing 8 VRAC subunit D*ENSMUSG000000460798
Lrrc8b / Q5DU41 / Volume-regulated anion channel subunit LRRC8B / Q6P9F7* / leucine rich repeat containing 8 VRAC subunit B*ENSMUSG000000706398
Lrrc18 / Q9CQ07 / Leucine-rich repeat-containing protein 18 / Q8N456* / leucine rich repeat containing 18*ENSMUSG000000416738
Lrrc57 / leucine-rich repeat-containing protein 57 isoform a / Q8N9N7* / leucine rich repeat containing 57*ENSMUSG000000272867
Rsu1 / Ras suppressor protein 1 / Q15404*ENSMUSG000000267275


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001715  Calponin homology domain
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005886 plasma membrane IBA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: T/tbtm
Genetic Background: involves: C57BL/6 * MOL-NIS

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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