ENSMUSG00000022801


Mus musculus

Features
Gene ID: ENSMUSG00000022801
  
Biological name :Lrch3
  
Synonyms : Leucine-rich repeat and calponin homology domain-containing protein 3 / Lrch3 / Q8BVU0
  
Possible biological names infered from orthology : leucine rich repeats and calponin homology domain containing 3 / Q96II8
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: B3
Gene start: 32914100
Gene end: 33015647
  
Corresponding Affymetrix probe sets: 10435162 (MoGene1.0st)   1432467_at (Mouse Genome 430 2.0 Array)   1443199_at (Mouse Genome 430 2.0 Array)   1454756_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000126964
Ensembl peptide - ENSMUSP00000127547
Ensembl peptide - ENSMUSP00000133034
Ensembl peptide - ENSMUSP00000131416
Ensembl peptide - ENSMUSP00000130708
Ensembl peptide - ENSMUSP00000130009
Ensembl peptide - ENSMUSP00000023491
Ensembl peptide - ENSMUSP00000117302
Ensembl peptide - ENSMUSP00000126308
NCBI entrez gene - 70144     See in Manteia.
MGI - MGI:1917394
RefSeq - XM_006522524
RefSeq - XM_006522533
RefSeq - XM_006522531
RefSeq - XM_006522530
RefSeq - XM_006522528
RefSeq - XM_006522527
RefSeq - XM_006522526
RefSeq - XM_006522525
RefSeq - NM_001081255
RefSeq - NM_001310672
RefSeq - NM_001310673
RefSeq - NM_001310674
RefSeq Peptide - NP_001074724
RefSeq Peptide - NP_001297601
RefSeq Peptide - NP_001297602
RefSeq Peptide - NP_001297603
swissprot - Q8BVU0
swissprot - E9QAU9
swissprot - B2RXP1
swissprot - F6YZL6
swissprot - F6Y466
swissprot - F6TPH7
swissprot - B7ZWM8
swissprot - E9Q0H5
swissprot - E9Q892
Ensembl - ENSMUSG00000022801
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrch3ENSDARG00000100679Danio rerio
 LRCH3ENSGALG00000007595Gallus gallus
 LRCH3ENSG00000186001Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrch2 / Q3UMG5 / Leucine-rich repeat and calponin homology domain-containing protein 2 / Q5VUJ6* / leucine rich repeats and calponin homology domain containing 2*ENSMUSG0000003129039
Lrch1 / P62046 / Leucine-rich repeat and calponin homology domain-containing protein 1 / Q9Y2L9* / leucine rich repeats and calponin homology domain containing 1*ENSMUSG0000006801538
Lrch4 / Q921G6 / Leucine-rich repeat and calponin homology domain-containing protein 4 / O75427* / leucine rich repeats and calponin homology domain containing 4*ENSMUSG0000009344537
Q921G6 / Gm20605 / predicted gene 20605 / LRCH4* / O75427* / leucine rich repeats and calponin homology domain containing 4*ENSMUSG0000002972037
Pidd1 / Q9ERV7 / p53-induced death domain-containing protein 1 / Q9HB75* / p53-induced death domain protein 1*ENSMUSG0000002550718
Lrrc28 / Q3TX51 / Leucine-rich repeat-containing protein 28 / Q86X40* / leucine rich repeat containing 28*ENSMUSG0000003055611
Lrrc69 / Q9D9Q0 / Leucine-rich repeat-containing protein 69 / Q6ZNQ3* / leucine rich repeat containing 69*ENSMUSG0000002315110
Q80WG5 / Gm28035 / predicted gene, 28035 / LRRC8A* / Q8IWT6* / leucine rich repeat containing 8 VRAC subunit A*ENSMUSG0000009904110
Lrrc8a / Q80WG5 / Volume-regulated anion channel subunit LRRC8A / Q8IWT6* / leucine rich repeat containing 8 VRAC subunit A*ENSMUSG0000000747610
Lrrc8b / Q5DU41 / Volume-regulated anion channel subunit LRRC8B / Q6P9F7* / leucine rich repeat containing 8 VRAC subunit B*ENSMUSG0000007063910
Lrrc2 / leucine rich repeat containing 2 / Q9BYS8*ENSMUSG000000324959
Lrrc8e / Q66JT1 / Volume-regulated anion channel subunit LRRC8E / Q6NSJ5* / leucine rich repeat containing 8 VRAC subunit E*ENSMUSG000000465899
Lrsam1 / Q80ZI6 / E3 ubiquitin-protein ligase LRSAM1 / Q6UWE0* / leucine rich repeat and sterile alpha motif containing 1*ENSMUSG000000267929
Lrrc8c / Q8R502 / Volume-regulated anion channel subunit LRRC8C / Q8TDW0* / leucine rich repeat containing 8 VRAC subunit C*ENSMUSG000000547209
Lrrc8d / Q8BGR2 / Volume-regulated anion channel subunit LRRC8D / Q7L1W4* / leucine rich repeat containing 8 VRAC subunit D*ENSMUSG000000460799
Lrrc39 / Q8BGI7 / Leucine-rich repeat-containing protein 39 / Q96DD0* / leucine rich repeat containing 39*ENSMUSG000000279618
Lrrc18 / Q9CQ07 / Leucine-rich repeat-containing protein 18 / Q8N456* / leucine rich repeat containing 18*ENSMUSG000000416737
Lrrc57 / leucine-rich repeat-containing protein 57 isoform a / Q8N9N7* / leucine rich repeat containing 57*ENSMUSG000000272867
Rsu1 / Ras suppressor protein 1 / Q15404*ENSMUSG000000267275


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001715  Calponin homology domain
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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