ENSDARG00000100679


Danio rerio

Features
Gene ID: ENSDARG00000100679
  
Biological name :lrch3
  
Synonyms : leucine-rich repeats and calponin homology (CH) domain containing 3 / lrch3
  
Possible biological names infered from orthology : Leucine-rich repeat and calponin homology domain-containing protein 3 / leucine rich repeats and calponin homology domain containing 3 / Q8BVU0 / Q96II8
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 3579829
Gene end: 3645885
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136403
Ensembl peptide - ENSDARP00000153778
Ensembl peptide - ENSDARP00000144520
Ensembl peptide - ENSDARP00000139222
Ensembl peptide - ENSDARP00000138650
Ensembl peptide - ENSDARP00000136920
Ensembl peptide - ENSDARP00000136638
NCBI entrez gene - 100126105     See in Manteia.
swissprot - A0A286YBW2
swissprot - A0A0R4IU16
swissprot - A0A0R4IRG5
swissprot - A0A0R4IR56
swissprot - A0A0R4IQA3
swissprot - A0A0R4ILJ9
ZFIN ID - ZDB-GENE-071004-44
Ensembl - ENSDARG00000100679
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRCH3ENSGALG00000007595Gallus gallus
 LRCH3ENSG00000186001Homo sapiens
 Lrch3ENSMUSG00000022801Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrch1 / leucine-rich repeats and calponin homology (CH) domain containing 1 / P62046* / Q9Y2L9* / leucine rich repeats and calponin homology domain containing 1* / Leucine-rich repeat and c...ENSDARG0000007877856
lrch4 / leucine-rich repeats and calponin homology (CH) domain containing 4 / Q921G6* / O75427* / Gm20605* / predicted gene 20605* / leucine rich repeats and calponin homology domain contai...ENSDARG0000006825856
lrch2 / leucine-rich repeats and calponin homology (CH) domain containing 2 / Q3UMG5* / Q5VUJ6* / leucine rich repeats and calponin homology domain containing 2* / Leucine-rich repeat and c...ENSDARG0000007558055
lrrc28 / leucine rich repeat containing 28 / Q86X40*ENSDARG0000005747725
pidd1 / p53-induced death domain protein 1 / Q9ERV7* / Q9HB75* / p53-induced death domain-containing protein 1 *ENSDARG0000007462625
si:dkey-1h4.4ENSDARG0000010554822
si:ch211-106h11.1ENSDARG0000001772020
LRRC69 / si:ch73-302o18.2 / Q6ZNQ3* / Q9D9Q0* / leucine rich repeat containing 69* / Leucine-rich repeat-containing protein 69 *ENSDARG0000008831620
LRRC8E / si:zfos-323e3.4 / Q6NSJ5* / Q66JT1* / AC093423.3* / Volume-regulated anion channel subunit LRRC8E * / leucine rich repeat containing 8 VRAC subunit E*ENSDARG0000007828320
lrrc8aa / leucine rich repeat containing 8 VRAC subunit Aa / Q8IWT6* / LRRC8A* / Q80WG5* / Gm28035* / predicted gene, 28035* / Volume-regulated anion channel subunit LRRC8A * / leucine rich...ENSDARG0000003218820
lrrc18b / leucine rich repeat containing 18b / Q9CQ07* / LRRC18* / Q8N456* / leucine rich repeat containing 18* / Leucine-rich repeat-containing protein 18 *ENSDARG0000007623620
lrrc8ab / leucine rich repeat containing 8 VRAC subunit Ab / Q8IWT6* / LRRC8A* / Q80WG5* / Gm28035* / predicted gene, 28035* / Volume-regulated anion channel subunit LRRC8A * / leucine rich...ENSDARG0000005215519
lrrc8c / leucine rich repeat containing 8 VRAC subunit C / Q8R502* / Q8TDW0* / Volume-regulated anion channel subunit LRRC8C *ENSDARG0000009991119
lrrc18a / leucine rich repeat containing 18a / Q9CQ07* / LRRC18* / Q8N456* / leucine rich repeat containing 18* / Leucine-rich repeat-containing protein 18 *ENSDARG0000007879018
lrrc8da / leucine rich repeat containing 8 VRAC subunit Da / LRRC8D* / Q7L1W4* / Q8BGR2* / Volume-regulated anion channel subunit LRRC8D * / leucine rich repeat containing 8 VRAC subunit D*ENSDARG0000010337018
lrrc8db / leucine rich repeat containing 8 VRAC subunit Db / LRRC8D* / Q7L1W4* / Q8BGR2* / Volume-regulated anion channel subunit LRRC8D * / leucine rich repeat containing 8 VRAC subunit D*ENSDARG0000010384017
F1R6I3 / lrrc39 / leucine rich repeat containing 39 / Q96DD0* / Q8BGI7* / Leucine-rich repeat-containing protein 39 *ENSDARG0000007146517
lrrc57 / Q6DHL5 / leucine rich repeat containing 57 / Q8N9N7* / leucine-rich repeat-containing protein 57 isoform a *ENSDARG0000004393816
lrsam1 / leucine rich repeat and sterile alpha motif containing 1 / Q6UWE0* / Q80ZI6* / E3 ubiquitin-protein ligase LRSAM1 *ENSDARG0000006068316
rsu1 / Ras suppressor protein 1 / Q15404*ENSDARG0000010288513


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001715  Calponin homology domain
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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