ENSGALG00000009939


Gallus gallus

Features
Gene ID: ENSGALG00000009939
  
Biological name :SPOP
  
Synonyms : speckle type BTB/POZ protein / SPOP
  
Possible biological names infered from orthology : Gm10696 / Gm10697 / Gm37596 / Gm4778 / Gm4858 / Gm5286 / Gm5773 / Gm9117 / Gm9125 / Mus musculus speckle-type POZ protein (Spop), transcript variant 2, mRNA. / O43791 / P0DMR5 / P0DMR6 / predicted pseudogene 5773 / predicted pseudogene 9117 / Q6YCH2 / Q6ZWS8 / Q717B2 / Q717B4 / TD and POZ domain containing 5 / TD and POZ domain containing-like isoform 1 / TD and POZ domain-containing protein 1 / TD and POZ domain-containing protein 1-like / TD and POZ domain-containing protein 3 / TD and POZ domain-containing protein 4 / Tdpoz1 / Tdpoz2 / Tdpoz3 / Tdpoz4 / Tdpoz5
  
Species: Gallus gallus
  
Chr. number: 27
Strand: 1
Band:
Gene start: 3351576
Gene end: 3376621
  
Corresponding Affymetrix probe sets: GgaAffx.7355.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016140
Ensembl peptide - ENSGALP00000044067
NCBI entrez gene - 425528     See in Manteia.
RefSeq - XM_015299466
RefSeq - XM_015299467
RefSeq - XM_423281
swissprot - E1C049
swissprot - A0A1D5NUP9
Ensembl - ENSGALG00000009939
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spopENSDARG00000100519Danio rerio
 SPOPENSG00000121067Homo sapiens
 Gm10696ENSMUSG00000074424Mus musculus
 Gm10697ENSMUSG00000095251Mus musculus
 Gm37596ENSMUSG00000103350Mus musculus
 Gm4778ENSMUSG00000089696Mus musculus
 Gm4858ENSMUSG00000096879Mus musculus
 Gm5286ENSMUSG00000090268Mus musculus
 Gm5773ENSMUSG00000068879Mus musculus
 Gm9117ENSMUSG00000095822Mus musculus
 Gm9125ENSMUSG00000094328Mus musculus
 P0DMR5ENSMUSG00000094084Mus musculus
 Q6YCH2ENSMUSG00000060256Mus musculus
 Q717B4ENSMUSG00000058005Mus musculus
 SpopENSMUSG00000057522Mus musculus
 Tdpoz2ENSMUSG00000103362Mus musculus
 Tdpoz5ENSMUSG00000094163Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPOPL / speckle type BTB/POZ protein like / Q2M2N2* / Q6IQ16* / Speckle-type POZ protein-like *ENSGALG0000001238086
KBTBD4 / kelch repeat and BTB domain containing 4 / Q8R179* / Q9NVX7* / Kelch repeat and BTB domain-containing protein 4 *ENSGALG0000000808915


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR002083  MATH/TRAF domain
 IPR008974  TRAF-like
 IPR011333  SKP1/BTB/POZ domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030162 regulation of proteolysis IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0019005 SCF ubiquitin ligase complex IBA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA


Pathways (from Reactome)
Pathway description
Hedgehog on state


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000005108 CUL3 / cullin 3 / Q13618* / Q9JLV5*  / complex
 ENSGALG00000040266 GLI3 / GLI family zinc finger 3 / P10071* / Q61602* / Transcriptional activator GLI3 Transcriptional repressor GLI3R*  / complex / reaction
 ENSGALG00000011630 GLI2 / GLI family zinc finger 2 / P10070* / Q0VGT2* / Zinc finger protein GLI2 *  / complex / reaction
 ENSGALG00000009939 SPOP / speckle type BTB/POZ protein / Gm5286* / Gm5773* / Gm9117* / Gm9125* / Tdpoz5* / Gm4778* / Gm4858* / O43791* / P0DMR5* / P0DMR6* / Q6YCH2* / Q6ZWS8* / Q717B2* / Q717B4* / Tdpoz1* / T...  / complex
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction
 ENSGALG00000011993 RBX1 / ring-box 1 / P62877* / P62878* / E3 ubiquitin-protein ligase RBX1 E3 ubiquitin-protein ligase RBX1, N-terminally processed*  / complex
 ENSGALG00000012380 SPOPL / speckle type BTB/POZ protein like / Q2M2N2* / Q6IQ16* / Speckle-type POZ protein-like *  / complex






 

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