ENSGALG00000025817


Gallus gallus

Features
Gene ID: ENSGALG00000025817
  
Biological name :NHLH1
  
Synonyms : helix-loop-helix protein 1 / NHLH1
  
Possible biological names infered from orthology : nescient helix-loop-helix 1 / nescient helix-loop-helix 2 / NHLH2 / Q02575 / Q02576 / Q02577 / Q64221
  
Species: Gallus gallus
  
Chr. number: 25
Strand: 1
Band:
Gene start: 1241617
Gene end: 1246230
  
Corresponding Affymetrix probe sets: Gga.141.1.S1_at (Chicken Array)   Gga.141.1.S2_at (Chicken Array)   Gga.141.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041829
NCBI entrez gene - 373910     See in Manteia.
RefSeq - NM_204121
RefSeq - XM_015298359
RefSeq Peptide - NP_989452
swissprot - R4GI98
Ensembl - ENSGALG00000025817
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nhlh2ENSDARG00000025495Danio rerio
 NHLH1ENSG00000171786Homo sapiens
 NHLH2ENSG00000177551Homo sapiens
 Nhlh1ENSMUSG00000051251Mus musculus
 Nhlh2ENSMUSG00000048540Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAL1 / T-cell acute lymphocytic leukemia protein 1 homolog / P22091* / P17542* / T cell acute lymphocytic leukemia 1* / TAL bHLH transcription factor 1, erythroid differentiation factor*ENSGALG0000002329634
TCF15 / transcription factor 15 / Q12870* / Q60756*ENSGALG0000002627629
TWIST3ENSGALG0000004022027
TWIST2ENSGALG0000000427426
HAND1 / heart- and neural crest derivatives-expressed protein 1 / O96004* / Q64279* / heart and neural crest derivatives expressed 1*ENSGALG0000003510425
TWIST1 / twist family bHLH transcription factor 1 / P26687* / Q15672* / twist basic helix-loop-helix transcription factor 1*ENSGALG0000004164025
TAL2 / TAL bHLH transcription factor 2 / Q16559* / Q62282* / T cell acute lymphocytic leukemia 2*ENSGALG0000002311425
HAND2 / heart and neural crest derivatives expressed 2 / P61296* / Q61039* / Heart- and neural crest derivatives-expressed protein 2 *ENSGALG0000003053024


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr